PF03721


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03721, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03721
Description UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

Occurence in the database

PF03721 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_970 FBDBKF_05355 79790 81133 -1 ugd UDP-glucose 6-dehydrogenase Morganella morganii S1
1 group_1331 FBDBKF_08235 25135 26397 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Morganella morganii S1
2 group_970 EHELCC_12235 100361 101704 1 ugd UDP-glucose 6-dehydrogenase Morganella morganii S2
3 group_1331 EHELCC_13290 137328 138590 -1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Morganella morganii S2
4 group_970 NLDBIP_12575 100316 101659 1 ugd UDP-glucose 6-dehydrogenase Morganella morganii S4
5 group_1331 NLDBIP_13630 137328 138590 -1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Morganella morganii S4
6 group_970 LHKJJB_12435 100361 101704 1 ugd UDP-glucose 6-dehydrogenase Morganella morganii S3
7 group_1331 LHKJJB_12925 23853 25115 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Morganella morganii S3
8 group_970 HKOGLL_11050 100361 101704 1 ugd UDP-glucose 6-dehydrogenase Morganella morganii S5
9 group_1331 HKOGLL_12105 137328 138590 -1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Morganella morganii S5
10 group_970 F4V73_RS05810 1236699 1238042 -1 UDP-glucose/GDP-mannose dehydrogenase family protein Morganella psychrotolerans
11 group_1331 F4V73_RS18785 26296 27558 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Morganella psychrotolerans
12 group_970 PMI_RS15770 3502000 3503166 -1 nucleotide sugar dehydrogenase Proteus mirabilis HI4320
13 group_1331 PMI_RS16495 3638526 3639788 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Proteus mirabilis HI4320