Homologs in group_1331

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08235 FBDBKF_08235 100.0 Morganella morganii S1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
EHELCC_13290 EHELCC_13290 100.0 Morganella morganii S2 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
NLDBIP_13630 NLDBIP_13630 100.0 Morganella morganii S4 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
HKOGLL_12105 HKOGLL_12105 100.0 Morganella morganii S5 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
F4V73_RS18785 F4V73_RS18785 96.0 Morganella psychrotolerans wecC UDP-N-acetyl-D-mannosamine dehydrogenase
PMI_RS16495 PMI_RS16495 84.5 Proteus mirabilis HI4320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase

Distribution of the homologs in the orthogroup group_1331

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1331

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P67067 0.0 706 78 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Shigella flexneri
P27829 0.0 706 78 0 420 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli (strain K12)
P67066 0.0 706 78 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli O157:H7
Q8ZAE4 0.0 705 79 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Yersinia pestis
Q8Z389 0.0 683 78 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhi
Q9L6R4 0.0 677 77 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P58591 0.0 575 63 2 419 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
Q45410 0.0 567 62 2 419 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia solanacearum
Q57871 1e-109 332 43 7 424 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A6VK13 1.78e-107 326 42 8 429 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
Q6LZC3 7.95e-107 325 42 8 429 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
A6USK4 1.1e-105 322 39 7 427 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
A4FY94 1.01e-104 319 40 9 432 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
A6UU98 6.27e-98 302 41 8 407 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
O59284 1.69e-91 285 38 9 422 1 PH1618 UDP-N-acetyl-D-mannosamine dehydrogenase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
G3XD94 1.57e-56 195 30 11 426 1 wbpA UDP-N-acetyl-D-glucosamine 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q04972 4.88e-40 150 29 8 352 3 vipA Vi polysaccharide biosynthesis protein VipA/TviB Salmonella typhi
O54068 1.62e-39 149 28 14 436 1 rkpK UDP-glucose 6-dehydrogenase Rhizobium meliloti (strain 1021)
P39861 6.41e-38 145 28 12 401 3 capL Protein CapL Staphylococcus aureus
P96718 2.97e-37 144 28 11 413 1 ywqF UDP-glucose 6-dehydrogenase YwqF Bacillus subtilis (strain 168)
O32271 1.07e-31 129 29 15 408 1 tuaD UDP-glucose 6-dehydrogenase TuaD Bacillus subtilis (strain 168)
Q92GB1 1.8e-31 127 28 9 356 3 udg UDP-glucose 6-dehydrogenase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
O86422 2.16e-31 127 28 9 355 3 udg UDP-glucose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
D4GYH5 3.45e-30 124 29 11 365 1 aglM UDP-glucose 6-dehydrogenase AglM Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
Q4UK39 3.12e-29 121 26 12 413 3 udg UDP-glucose 6-dehydrogenase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q1RKF8 3.23e-29 121 28 9 356 3 udg UDP-glucose 6-dehydrogenase Rickettsia bellii (strain RML369-C)
O05973 2.03e-27 116 28 12 359 3 udg UDP-glucose 6-dehydrogenase Rickettsia prowazekii (strain Madrid E)
O34862 1.09e-26 114 25 10 407 3 ytcA Putative UDP-glucose 6-dehydrogenase YtcA Bacillus subtilis (strain 168)
Q68VX0 2.33e-26 113 27 12 359 3 udg UDP-glucose 6-dehydrogenase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q19905 3.33e-26 113 27 11 402 1 sqv-4 UDP-glucose 6-dehydrogenase Caenorhabditis elegans
Q58454 2.49e-25 112 28 6 285 3 MJ1054 Uncharacterized protein MJ1054 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58454 9.04e-05 48 36 1 68 3 MJ1054 Uncharacterized protein MJ1054 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O07299 1.21e-24 108 26 13 446 3 algD GDP-mannose 6-dehydrogenase Pseudomonas savastanoi pv. phaseolicola
Q887P8 1.22e-24 108 26 13 446 2 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q2QS13 1.23e-24 108 29 12 364 2 UGD5 UDP-glucose 6-dehydrogenase 5 Oryza sativa subsp. japonica
P59793 1.34e-24 108 26 12 439 3 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. syringae
Q2QS14 2.84e-24 107 28 12 363 2 UGD4 UDP-glucose 6-dehydrogenase 4 Oryza sativa subsp. japonica
Q88NC4 2.96e-24 107 25 11 442 3 algD GDP-mannose 6-dehydrogenase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q9AUV6 1.54e-23 105 28 12 364 2 UGD3 UDP-glucose 6-dehydrogenase 3 Oryza sativa subsp. japonica
P51585 3.46e-23 104 24 12 421 3 algD GDP-mannose 6-dehydrogenase Azotobacter vinelandii
P11759 7.29e-23 103 26 10 364 1 algD GDP-mannose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O02373 8.58e-23 103 26 13 411 1 sgl UDP-glucose 6-dehydrogenase Drosophila melanogaster
B7F958 9.69e-22 100 27 11 365 2 UGD2 UDP-glucose 6-dehydrogenase 2 Oryza sativa subsp. japonica
Q9FZE1 9.91e-22 100 28 15 386 1 UGD1 UDP-glucose 6-dehydrogenase 1 Arabidopsis thaliana
Q9LIA8 3.17e-21 99 27 12 385 1 UGD2 UDP-glucose 6-dehydrogenase 2 Arabidopsis thaliana
Q96558 3.97e-21 98 27 11 366 2 UGD1 UDP-glucose 6-dehydrogenase 1 Glycine max
Q9FM01 7.91e-21 97 26 11 366 1 UGD4 UDP-glucose 6-dehydrogenase 4 Arabidopsis thaliana
Q75GS4 2.47e-20 96 27 12 365 3 UGD1 UDP-glucose 6-dehydrogenase 1 Oryza sativa subsp. japonica
Q9LF33 1.25e-19 94 27 12 366 1 UGD3 UDP-glucose 6-dehydrogenase 3 Arabidopsis thaliana
P12378 1.32e-18 91 25 12 376 1 UGDH UDP-glucose 6-dehydrogenase Bos taurus
Q5F3T9 2.43e-18 90 25 11 375 2 UGDH UDP-glucose 6-dehydrogenase Gallus gallus
Q5R7B3 2.47e-18 90 25 12 376 2 UGDH UDP-glucose 6-dehydrogenase Pongo abelii
O70475 2.51e-18 90 25 12 376 1 Ugdh UDP-glucose 6-dehydrogenase Mus musculus
O70199 2.98e-18 90 25 12 376 1 Ugdh UDP-glucose 6-dehydrogenase Rattus norvegicus
O60701 3.47e-18 90 25 12 376 1 UGDH UDP-glucose 6-dehydrogenase Homo sapiens
Q47329 4.73e-15 79 22 10 368 3 kfiD UDP-glucose 6-dehydrogenase Escherichia coli
O33952 8.5e-14 75 23 10 289 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli
Q04873 1.71e-13 75 25 9 286 3 udg UDP-glucose 6-dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q0P8H3 2.2e-12 71 21 15 391 1 kfiD UDP-glucose 6-dehydrogenase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q04872 1.12e-10 66 23 10 288 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O111:H-
Q7DBF9 3.12e-10 65 23 10 289 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O157:H7
P37791 9.57e-10 63 22 11 321 5 udg Putative UDP-glucose 6-dehydrogenase Shigella flexneri
Q8FG45 1.21e-09 63 23 10 289 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P76373 2.5e-09 62 23 10 289 1 ugd UDP-glucose 6-dehydrogenase Escherichia coli (strain K12)
Q57346 2.22e-07 56 24 11 284 3 cap3A UDP-glucose 6-dehydrogenase Streptococcus pneumoniae

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_12925
Feature type CDS
Gene wecC
Product UDP-N-acetyl-D-mannosamine dehydrogenase
Location 23853 - 25115 (strand: 1)
Length 1263 (nucleotides) / 420 (amino acids)

Contig

Accession ZDB_370
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1331
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain
PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0677 Cell wall/membrane/envelope biogenesis (M) M UDP-N-acetyl-D-mannosaminuronate dehydrogenase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG007636 UDP-N-acetyl-D-mannosamine dehydrogenase VF0624 Immune modulation

Protein Sequence

MSFETISVVGLGYIGLPTAAAFASRQKKVVGVDVNQHAVDTINRGEIHIVEPDLGAVVKTAVEGGFLKAFTKPQPADAFLIAVPTPFKGDHEPDLAFVQSAAESIAPVLKKGDLIILESTSPVGATEQMAEWLAAARPDLTFPQQAGEESDIDIAYCPERVLPGQVMVELIKNDRVVGGMTPKSSKRASELYYIFLEGECVITNARTAEMCKLTENSFRDVNIAFANELSLICADQGINVWELISLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPKQARLIHTARLVNDGKPLWVIDQVKQAVADCLTETGKRANEVTIACFGLAFKPNIDDLRESPAVQVTKMVAEWHAGKTLAVEPNVHELPGKLKGLTELVSIEKAITDADIILLLVDHTPFRGIPGSQIPQKWIIDTKGVWR

Flanking regions ( +/- flanking 50bp)

AAAGCGTGCCAGCGTATTCTTGAAGCATTGAAAAACAATCAGGTGACATTATGAGTTTTGAAACTATTTCTGTTGTCGGTCTGGGTTATATCGGTTTACCAACAGCGGCAGCTTTTGCCTCCCGTCAGAAGAAAGTGGTTGGTGTGGATGTGAACCAGCATGCGGTTGATACCATTAACCGTGGTGAAATTCATATTGTGGAGCCGGACCTGGGCGCGGTTGTGAAAACAGCTGTGGAAGGCGGTTTCCTGAAAGCCTTCACCAAACCTCAGCCTGCTGATGCGTTCCTGATTGCCGTACCGACACCGTTTAAAGGTGATCATGAACCGGACCTGGCCTTTGTGCAGTCTGCGGCGGAATCTATCGCCCCGGTACTGAAAAAAGGTGACCTGATTATTCTCGAATCCACCTCGCCGGTCGGTGCGACTGAGCAGATGGCTGAGTGGCTGGCAGCGGCACGTCCTGATCTGACTTTCCCGCAGCAGGCGGGTGAAGAATCGGATATCGATATCGCCTACTGCCCTGAGCGTGTGCTGCCGGGCCAGGTGATGGTCGAACTGATTAAAAACGACCGTGTGGTCGGCGGGATGACACCAAAATCCTCAAAACGCGCCAGTGAACTCTATTATATCTTCCTGGAAGGTGAGTGTGTCATCACTAATGCACGTACGGCTGAGATGTGCAAACTGACCGAAAACAGCTTCCGCGATGTGAACATTGCGTTTGCGAATGAATTATCACTGATTTGTGCTGACCAGGGCATTAATGTCTGGGAACTGATCAGCCTGGCAAACCGCCATCCGCGTGTGAATATCCTGCAGCCGGGTCCGGGTGTCGGCGGCCACTGTATCGCAGTTGACCCGTGGTTCATCGTGGCGCAGAACCCGAAACAGGCCCGTCTGATCCACACTGCGCGTCTGGTTAACGACGGCAAACCATTGTGGGTTATCGATCAGGTAAAACAAGCGGTTGCTGATTGCCTGACTGAAACCGGCAAACGTGCCAATGAAGTGACGATTGCCTGCTTTGGCCTGGCATTCAAACCAAATATCGACGATCTGCGTGAAAGCCCTGCGGTTCAGGTCACCAAAATGGTGGCAGAGTGGCATGCAGGGAAAACTCTGGCGGTTGAGCCGAATGTTCATGAACTGCCGGGCAAACTGAAAGGTCTGACAGAGCTGGTCTCCATCGAAAAAGCGATTACTGACGCGGATATTATTCTGCTGCTGGTCGATCACACGCCGTTCAGAGGCATTCCGGGCAGCCAGATCCCGCAGAAATGGATCATCGATACCAAAGGAGTATGGCGTTGAAACGTATTTTAGTGACAGGCGGAGCCGGTTTTATCGGCTCTGCGGTTGTT