Homologs in group_1331

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08235 FBDBKF_08235 84.5 Morganella morganii S1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
EHELCC_13290 EHELCC_13290 84.5 Morganella morganii S2 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
NLDBIP_13630 NLDBIP_13630 84.5 Morganella morganii S4 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
LHKJJB_12925 LHKJJB_12925 84.5 Morganella morganii S3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
HKOGLL_12105 HKOGLL_12105 84.5 Morganella morganii S5 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
F4V73_RS18785 F4V73_RS18785 83.6 Morganella psychrotolerans wecC UDP-N-acetyl-D-mannosamine dehydrogenase

Distribution of the homologs in the orthogroup group_1331

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1331

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZAE4 0.0 697 77 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Yersinia pestis
P67067 0.0 693 78 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Shigella flexneri
P27829 0.0 693 78 0 420 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli (strain K12)
P67066 0.0 693 78 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli O157:H7
Q8Z389 0.0 679 78 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhi
Q9L6R4 0.0 676 77 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P58591 0.0 572 63 2 419 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
Q45410 0.0 561 61 2 419 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia solanacearum
Q57871 5.97e-110 333 43 7 423 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A6VK13 2.81e-109 331 41 8 429 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
Q6LZC3 2.65e-108 328 41 8 429 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
A4FY94 3.27e-107 326 41 8 426 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
A6USK4 8.09e-105 320 39 7 428 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
A6UU98 4.6e-101 310 42 8 398 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
O59284 2.47e-96 298 38 10 429 1 PH1618 UDP-N-acetyl-D-mannosamine dehydrogenase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
G3XD94 1.51e-54 190 29 9 423 1 wbpA UDP-N-acetyl-D-glucosamine 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O54068 1.09e-47 171 29 12 435 1 rkpK UDP-glucose 6-dehydrogenase Rhizobium meliloti (strain 1021)
P96718 9.26e-40 150 28 11 412 1 ywqF UDP-glucose 6-dehydrogenase YwqF Bacillus subtilis (strain 168)
Q04972 1.32e-39 149 29 15 412 3 vipA Vi polysaccharide biosynthesis protein VipA/TviB Salmonella typhi
P39861 1.2e-38 147 28 14 407 3 capL Protein CapL Staphylococcus aureus
Q92GB1 4.74e-35 137 29 12 413 3 udg UDP-glucose 6-dehydrogenase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q1RKF8 3.06e-34 135 28 13 439 3 udg UDP-glucose 6-dehydrogenase Rickettsia bellii (strain RML369-C)
Q4UK39 1.09e-32 131 28 11 413 3 udg UDP-glucose 6-dehydrogenase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
O32271 1.75e-32 130 28 10 356 1 tuaD UDP-glucose 6-dehydrogenase TuaD Bacillus subtilis (strain 168)
O05973 5.48e-32 129 28 12 414 3 udg UDP-glucose 6-dehydrogenase Rickettsia prowazekii (strain Madrid E)
O86422 8.81e-31 126 26 14 442 3 udg UDP-glucose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q68VX0 1.57e-30 125 28 13 414 3 udg UDP-glucose 6-dehydrogenase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
D4GYH5 2.48e-30 124 29 12 363 1 aglM UDP-glucose 6-dehydrogenase AglM Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
Q2QS13 1.69e-28 120 29 13 367 2 UGD5 UDP-glucose 6-dehydrogenase 5 Oryza sativa subsp. japonica
Q88NC4 5.36e-28 118 25 15 444 3 algD GDP-mannose 6-dehydrogenase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
O07299 6.09e-28 117 25 15 441 3 algD GDP-mannose 6-dehydrogenase Pseudomonas savastanoi pv. phaseolicola
Q9AUV6 1.07e-27 117 29 13 367 2 UGD3 UDP-glucose 6-dehydrogenase 3 Oryza sativa subsp. japonica
P59793 2.54e-27 116 25 15 441 3 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. syringae
Q2QS14 2.64e-27 116 28 13 367 2 UGD4 UDP-glucose 6-dehydrogenase 4 Oryza sativa subsp. japonica
O34862 3.95e-27 115 24 11 407 3 ytcA Putative UDP-glucose 6-dehydrogenase YtcA Bacillus subtilis (strain 168)
Q96558 3.97e-27 116 26 13 442 2 UGD1 UDP-glucose 6-dehydrogenase 1 Glycine max
Q887P8 4.56e-27 115 25 15 441 2 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q19905 2.22e-26 114 26 15 434 1 sqv-4 UDP-glucose 6-dehydrogenase Caenorhabditis elegans
P11759 4.02e-26 112 27 12 361 1 algD GDP-mannose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9FM01 5.87e-26 112 25 14 444 1 UGD4 UDP-glucose 6-dehydrogenase 4 Arabidopsis thaliana
Q9FZE1 9.85e-26 112 26 16 444 1 UGD1 UDP-glucose 6-dehydrogenase 1 Arabidopsis thaliana
P51585 3.04e-25 110 24 14 445 3 algD GDP-mannose 6-dehydrogenase Azotobacter vinelandii
B7F958 3.79e-25 110 28 12 367 2 UGD2 UDP-glucose 6-dehydrogenase 2 Oryza sativa subsp. japonica
Q58454 5.65e-25 111 27 7 286 3 MJ1054 Uncharacterized protein MJ1054 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q75GS4 9.57e-25 109 24 13 448 3 UGD1 UDP-glucose 6-dehydrogenase 1 Oryza sativa subsp. japonica
Q9LF33 1.03e-24 109 27 12 368 1 UGD3 UDP-glucose 6-dehydrogenase 3 Arabidopsis thaliana
Q9LIA8 9.21e-24 106 25 13 444 1 UGD2 UDP-glucose 6-dehydrogenase 2 Arabidopsis thaliana
O02373 9.53e-22 100 27 12 370 1 sgl UDP-glucose 6-dehydrogenase Drosophila melanogaster
Q5F3T9 3.37e-19 93 26 12 376 2 UGDH UDP-glucose 6-dehydrogenase Gallus gallus
Q5R7B3 1.15e-18 91 26 12 376 2 UGDH UDP-glucose 6-dehydrogenase Pongo abelii
P12378 1.32e-18 91 26 12 376 1 UGDH UDP-glucose 6-dehydrogenase Bos taurus
O70199 2.93e-18 90 26 12 376 1 Ugdh UDP-glucose 6-dehydrogenase Rattus norvegicus
O60701 3.47e-18 90 26 12 376 1 UGDH UDP-glucose 6-dehydrogenase Homo sapiens
Q47329 1.49e-17 87 23 14 421 3 kfiD UDP-glucose 6-dehydrogenase Escherichia coli
O70475 1.71e-17 87 25 12 376 1 Ugdh UDP-glucose 6-dehydrogenase Mus musculus
O33952 7.95e-16 82 25 11 283 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli
Q04873 3.88e-15 80 26 11 284 3 udg UDP-glucose 6-dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q04872 2.16e-12 71 24 11 285 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O111:H-
Q0P8H3 7.31e-12 70 22 10 285 1 kfiD UDP-glucose 6-dehydrogenase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q7DBF9 9.05e-12 69 24 11 285 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O157:H7
P37791 1.76e-11 68 24 11 285 5 udg Putative UDP-glucose 6-dehydrogenase Shigella flexneri
Q8FG45 3.44e-11 68 24 11 285 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P76373 6.41e-11 67 24 11 285 1 ugd UDP-glucose 6-dehydrogenase Escherichia coli (strain K12)
Q57346 5.5e-09 61 22 10 285 3 cap3A UDP-glucose 6-dehydrogenase Streptococcus pneumoniae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16495
Feature type CDS
Gene wecC
Product UDP-N-acetyl-D-mannosamine dehydrogenase
Location 3638526 - 3639788 (strand: 1)
Length 1263 (nucleotides) / 420 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1331
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain
PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0677 Cell wall/membrane/envelope biogenesis (M) M UDP-N-acetyl-D-mannosaminuronate dehydrogenase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG007635 UDP-N-acetyl-D-mannosamine dehydrogenase VF0624 Immune modulation

Protein Sequence

MSFETISVIGLGYIGLPTAAAFASRKKSVIGVDVNQHAVDTINKGQIHIVEPDLDKVVKQAVEEGHLKAYTTPQPADAYLIAVPTPFKGEHEPDLAYVEAAARSIAPVLKKGDLIILESTSPVGTTEQMSQWLAQAREDLTFPHQQGENADIDIAYCPERVLPGQVMVELIRNDRVVGGMNRKSSERASELYKIFLEGECVITNARTAEMCKLTENSFRDVNIAFANELSLICADQDINVWELISLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPKQSRLIHTARLVNDGKPVWVIDQVKAAVADCLTETGKRANEIKIACFGLAFKPNIDDLRESPAMNITQQVANWHSGKTFAVEPNIHELPTKLKGITELVSTEQALKEADIVLMLVDHQQFKAIPGSQVTQKWIVDTKGVWR

Flanking regions ( +/- flanking 50bp)

CATGCCTGCCAACGTATTCTTGAAGCATTGAAAAATAATCAGGTGACATTATGAGTTTTGAAACTATTTCTGTTATCGGCCTCGGCTACATTGGATTACCAACAGCGGCAGCTTTTGCCTCTCGTAAAAAAAGTGTTATTGGTGTGGATGTTAACCAACACGCTGTTGATACCATTAATAAAGGTCAAATTCACATCGTTGAACCTGATCTGGATAAAGTGGTAAAACAAGCCGTTGAAGAAGGGCATTTAAAAGCCTATACCACACCACAACCCGCAGACGCTTACCTTATTGCAGTTCCAACCCCCTTTAAAGGCGAACATGAACCCGATCTGGCTTATGTTGAAGCCGCTGCGCGTTCAATAGCACCTGTACTTAAGAAAGGTGATTTGATTATTTTAGAATCAACCTCACCCGTTGGAACAACAGAACAAATGTCACAGTGGCTTGCGCAGGCTCGTGAGGATTTAACTTTCCCACATCAACAAGGTGAAAATGCCGATATTGATATCGCTTATTGCCCTGAGCGTGTATTGCCAGGACAAGTGATGGTTGAACTTATCCGCAATGACCGTGTTGTGGGGGGCATGAACCGTAAATCATCAGAGCGTGCCAGCGAGTTATACAAAATTTTCCTTGAAGGTGAATGTGTTATCACTAATGCCCGTACTGCAGAGATGTGTAAGCTAACAGAAAATAGCTTCCGTGACGTGAATATTGCATTTGCTAATGAGTTATCCCTGATTTGTGCTGACCAAGATATTAATGTGTGGGAGCTAATTAGTTTGGCTAATCGTCATCCTCGCGTGAATATTTTACAGCCGGGTCCTGGTGTCGGTGGACACTGTATTGCCGTTGATCCTTGGTTTATCGTGTCTCAAAATCCTAAACAATCACGCTTAATTCATACTGCCCGTTTGGTCAATGATGGCAAACCTGTATGGGTTATCGACCAAGTTAAAGCCGCTGTGGCGGATTGTTTAACTGAAACCGGTAAACGTGCTAACGAGATCAAAATTGCCTGCTTTGGTTTAGCCTTTAAACCTAATATTGACGATTTACGTGAAAGTCCAGCAATGAATATCACCCAACAAGTTGCTAACTGGCATAGTGGGAAAACATTTGCTGTGGAGCCAAATATTCATGAATTACCGACTAAATTAAAAGGTATCACTGAATTAGTCTCTACAGAGCAGGCATTAAAAGAGGCGGATATTGTTTTAATGTTAGTCGACCATCAACAGTTTAAAGCGATACCTGGTAGCCAAGTTACCCAAAAATGGATTGTCGATACAAAAGGAGTATGGCGTTGAGACGTATTTTAGTCACAGGCGGCGCCGGTTTTATCGGCTCCGCGGTTGTT