PF03471


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03471, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 28 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03471
Description Transporter associated domain

Occurence in the database

PF03471 is associated with 28 different proteins (see tab "Protein list" and "Profile")
The 28 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1191 FBDBKF_06875 39624 41198 1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S1
1 group_1380 FBDBKF_08530 85520 86890 -1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S1
2 group_1540 FBDBKF_09985 89798 90688 1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S1
3 group_2038 FBDBKF_15290 66463 67755 -1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S1
4 group_1191 EHELCC_04095 144988 146562 -1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S2
5 group_1540 EHELCC_04785 281763 282653 1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S2
6 group_2038 EHELCC_10955 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S2
7 group_1380 EHELCC_12995 76835 78205 1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S2
8 group_1191 NLDBIP_04095 144784 146358 -1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S4
9 group_1540 NLDBIP_04785 281559 282449 1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S4
10 group_2038 NLDBIP_11300 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S4
11 group_1380 NLDBIP_13335 76835 78205 1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S4
12 group_1191 LHKJJB_09925 144898 146472 -1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S3
13 group_2038 LHKJJB_11160 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S3
14 group_1380 LHKJJB_13220 84238 85608 -1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S3
15 group_1540 LHKJJB_13845 52929 53819 -1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S3
16 group_1191 HKOGLL_09050 44580 46154 1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S5
17 group_2038 HKOGLL_09770 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S5
18 group_1380 HKOGLL_11810 76835 78205 1 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family Morganella morganii S5
19 group_1540 HKOGLL_12690 90579 91469 1 corC CNNM family magnesium/cobalt transport protein CorC Morganella morganii S5
20 group_1540 F4V73_RS00360 81917 82807 -1 corC CNNM family magnesium/cobalt transport protein CorC Morganella psychrotolerans
21 group_1191 F4V73_RS01020 217489 219057 1 TerC family protein Morganella psychrotolerans
22 group_1380 F4V73_RS09755 51927 53279 -1 hemolysin family protein Morganella psychrotolerans
23 group_2038 F4V73_RS12160 16483 17775 1 CNNM domain-containing protein Morganella psychrotolerans
24 group_2038 PMI_RS01845 434235 435509 -1 HlyC/CorC family transporter Proteus mirabilis HI4320
25 group_1540 PMI_RS02190 512047 512928 -1 corC CNNM family magnesium/cobalt transport protein CorC Proteus mirabilis HI4320
26 group_1191 PMI_RS03215 711028 712608 -1 TerC family protein Proteus mirabilis HI4320
27 group_1380 PMI_RS16865 3712697 3714070 -1 hemolysin family protein Proteus mirabilis HI4320