PF03279


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03279, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03279
Description Bacterial lipid A biosynthesis acyltransferase

Occurence in the database

PF03279 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_37 FBDBKF_00175 29191 30120 -1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S1
1 group_37 FBDBKF_00910 165605 166546 1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S1
2 group_641 FBDBKF_02095 107231 108211 1 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase Morganella morganii S1
3 group_37 EHELCC_00635 142322 143263 -1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S2
4 group_37 EHELCC_01370 278748 279677 1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S2
5 group_641 EHELCC_02565 495051 496031 1 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase Morganella morganii S2
6 group_641 NLDBIP_00895 184105 185085 -1 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase Morganella morganii S4
7 group_37 NLDBIP_02090 400459 401388 -1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S4
8 group_37 NLDBIP_02825 536873 537814 1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S4
9 group_641 LHKJJB_01140 207600 208580 1 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase Morganella morganii S3
10 group_37 LHKJJB_03605 7700 8629 -1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S3
11 group_37 LHKJJB_04340 144114 145055 1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S3
12 group_641 HKOGLL_01180 213111 214091 1 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase Morganella morganii S5
13 group_37 HKOGLL_02705 142527 143468 -1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S5
14 group_37 HKOGLL_03440 278953 279882 1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) Morganella morganii S5
15 group_641 F4V73_RS04460 943408 944388 1 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase Morganella psychrotolerans
16 group_37 F4V73_RS06905 1431338 1432279 1 Kdo(2)-lipid IV(A) acyltransferase Morganella psychrotolerans
17 group_37 F4V73_RS07715 1613673 1614599 -1 lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase Morganella psychrotolerans
18 group_37 PMI_RS03970 894201 895127 1 lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase Proteus mirabilis HI4320
19 group_641 PMI_RS05570 1214640 1215614 1 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase Proteus mirabilis HI4320
20 group_37 PMI_RS08250 1802716 1803657 1 Kdo(2)-lipid IV(A) acyltransferase Proteus mirabilis HI4320