PF02811


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02811, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 23 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02811
Description PHP domain

Occurence in the database

PF02811 is associated with 23 different proteins (see tab "Protein list" and "Profile")
The 23 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_266 FBDBKF_05150 37185 38054 -1 yciV 5'-3' exoribonuclease TrpH/YciV (RNase AM), contains PHP domain Morganella morganii S1
1 group_279 FBDBKF_05935 10313 13792 -1 dnaE DNA polymerase III subunit alpha Morganella morganii S1
2 group_2333 FBDBKF_18300 24242 24982 1 hIS2 Histidinol phosphatase or related hydrolase of the PHP family Morganella morganii S1
3 group_279 EHELCC_08980 10885 14364 -1 dnaE DNA polymerase III subunit alpha Morganella morganii S2
4 group_266 EHELCC_12440 143440 144309 1 yciV 5'-3' exoribonuclease TrpH/YciV (RNase AM), contains PHP domain Morganella morganii S2
5 group_2333 EHELCC_18335 24115 24855 1 hIS2 Histidinol phosphatase or related hydrolase of the PHP family Morganella morganii S2
6 group_279 NLDBIP_09360 10885 14364 -1 dnaE DNA polymerase III subunit alpha Morganella morganii S4
7 group_266 NLDBIP_12780 143395 144264 1 yciV 5'-3' exoribonuclease TrpH/YciV (RNase AM), contains PHP domain Morganella morganii S4
8 group_2333 NLDBIP_18260 24316 25056 1 hIS2 Histidinol phosphatase or related hydrolase of the PHP family Morganella morganii S4
9 group_279 LHKJJB_08395 202874 206353 1 dnaE DNA polymerase III subunit alpha Morganella morganii S3
10 group_266 LHKJJB_12640 143440 144309 1 yciV 5'-3' exoribonuclease TrpH/YciV (RNase AM), contains PHP domain Morganella morganii S3
11 group_2333 LHKJJB_18455 24154 24894 1 hIS2 Histidinol phosphatase or related hydrolase of the PHP family Morganella morganii S3
12 group_279 HKOGLL_07945 202874 206353 1 dnaE DNA polymerase III subunit alpha Morganella morganii S5
13 group_266 HKOGLL_11255 143440 144309 1 yciV 5'-3' exoribonuclease TrpH/YciV (RNase AM), contains PHP domain Morganella morganii S5
14 group_2333 HKOGLL_18190 24132 24872 1 hIS2 Histidinol phosphatase or related hydrolase of the PHP family Morganella morganii S5
15 group_2333 F4V73_RS01810 397338 398105 1 phosphatase Morganella psychrotolerans
16 group_266 F4V73_RS05605 1192300 1193160 -1 PHP domain-containing protein Morganella psychrotolerans
17 group_279 F4V73_RS15960 199662 203141 1 dnaE DNA polymerase III subunit alpha Morganella psychrotolerans
18 group_279 F4V73_RS18015 43726 47259 -1 dnaE DNA polymerase III subunit alpha Morganella psychrotolerans
19 group_2333 PMI_RS04870 1066360 1067097 1 phosphatase Proteus mirabilis HI4320
20 group_266 PMI_RS06475 1420406 1421266 -1 PHP domain-containing protein Proteus mirabilis HI4320
21 group_266 PMI_RS10965 2413793 2414617 -1 PHP domain-containing protein Proteus mirabilis HI4320
22 group_279 PMI_RS11210 2465806 2469288 -1 dnaE DNA polymerase III subunit alpha Proteus mirabilis HI4320