PF02036


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02036, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02036
Description SCP-2 sterol transfer family

Occurence in the database

PF02036 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1417 FBDBKF_08755 133254 133775 1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S1
1 group_2216 FBDBKF_16935 14973 15647 -1 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain Morganella morganii S1
2 group_1417 EHELCC_12770 29950 30471 -1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S2
3 group_2216 EHELCC_16655 52863 53537 1 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain Morganella morganii S2
4 group_1417 NLDBIP_13110 29950 30471 -1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S4
5 group_2216 NLDBIP_16865 52863 53537 1 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain Morganella morganii S4
6 group_1417 LHKJJB_13445 131972 132493 1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S3
7 group_2216 LHKJJB_16605 14973 15647 -1 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain Morganella morganii S3
8 group_1417 HKOGLL_11585 29950 30471 -1 ubiT Ubiquinone biosynthesis accessory factor UbiT, lipid carrier SCP2 domain Morganella morganii S5
9 group_2216 HKOGLL_17570 14973 15647 -1 ubiJ Ubiquinone biosynthesis protein UbiJ, contains SCP2 domain Morganella morganii S5
10 group_1417 F4V73_RS09970 101316 101837 1 SCP2 domain-containing protein Morganella psychrotolerans
11 group_2216 F4V73_RS18405 15120 15794 -1 SCP2 sterol-binding domain-containing protein Morganella psychrotolerans
12 group_1417 PMI_RS17160 3774627 3775160 1 SCP2 domain-containing protein Proteus mirabilis HI4320
13 group_2216 PMI_RS17580 3859033 3859674 1 SCP2 domain-containing protein Proteus mirabilis HI4320