Orthogroup:group_1473



Homologs in group_1473

Help

7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09495 FBDBKF_09495 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_09915 EHELCC_09915 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_19235 NLDBIP_19235 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_19135 LHKJJB_19135 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_18915 HKOGLL_18915 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS10485 F4V73_RS10485 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
F4V73_RS19140 F4V73_RS19140 Morganella psychrotolerans - helix-turn-helix transcriptional regulator

Distribution of group_1473 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1473 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1473

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1473.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 5
2 - 2

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 5
2 helix-turn-helix transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 7 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 7 Helix-turn-helix

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Endothelial differentiation-related factor 1 2
Endothelial differentiation-related factor 1 homolog 1
Repressor protein CI (Fragment) 1
Uncharacterized transcriptional regulator in ATPase CF(0) region 1

Protein length

Min length 80
Max length 99
Mean length (sd) 94.9 (6.6)
Median length 97.0

Protein length distribution