PF01957


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01957, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01957
Description NfeD-like C-terminal, partner-binding

Occurence in the database

PF01957 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1781 FBDBKF_12985 97180 97632 1 ybbJ Membrane protein implicated in regulation of membrane protease activity Morganella morganii S1
1 group_1781 EHELCC_06300 267212 267664 1 ybbJ Membrane protein implicated in regulation of membrane protease activity Morganella morganii S2
2 group_1781 NLDBIP_06620 308277 308729 1 ybbJ Membrane protein implicated in regulation of membrane protease activity Morganella morganii S4
3 group_1781 LHKJJB_03500 285801 286253 1 ybbJ Membrane protein implicated in regulation of membrane protease activity Morganella morganii S3
4 group_1781 HKOGLL_06975 207665 208117 1 ybbJ Membrane protein implicated in regulation of membrane protease activity Morganella morganii S5
5 group_1781 F4V73_RS16170 37316 37768 1 NfeD family protein Morganella psychrotolerans
6 group_1781 PMI_RS10700 2352299 2352820 1 NfeD family protein Proteus mirabilis HI4320