Orthogroup:group_1820


Homologs in group_1820

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13480 FBDBKF_13480 Morganella morganii S1 ybcI metal-dependent hydrolase
EHELCC_08615 EHELCC_08615 Morganella morganii S2 ybcI metal-dependent hydrolase
NLDBIP_08940 NLDBIP_08940 Morganella morganii S4 ybcI metal-dependent hydrolase
LHKJJB_05325 LHKJJB_05325 Morganella morganii S3 ybcI metal-dependent hydrolase
HKOGLL_05590 HKOGLL_05590 Morganella morganii S5 ybcI metal-dependent hydrolase
F4V73_RS03285 F4V73_RS03285 Morganella psychrotolerans - metal-dependent hydrolase
PMI_RS04955 PMI_RS04955 Proteus mirabilis HI4320 - metal-dependent hydrolase

Distribution of group_1820 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1820 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1820

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1820.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybcI 5
2 - 2

Product

# Product Occurence
1 metal-dependent hydrolase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1988 7 R General function prediction only (R) Membrane-bound metal-dependent hydrolase YbcI, DUF457 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07038 7 inner membrane protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04307 7 LexA-binding, inner membrane-associated putative hydrolase

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Inner membrane protein YdjM 2
Uncharacterized protein YvsG 1

Protein length

Min length 183
Max length 188
Mean length (sd) 185.1 (1.5)
Median length 185.0

Protein length distribution