PF01627


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01627, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01627
Description Hpt domain

Occurence in the database

PF01627 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_432 FBDBKF_00375 47826 50540 1 rcsD phosphotransferase RcsD Morganella morganii S1
1 group_484 FBDBKF_00795 145412 147484 -1 cheA chemotaxis protein CheA Morganella morganii S1
2 group_713 FBDBKF_03095 17386 19719 -1 arcB aerobic respiration two-component sensor histidine kinase ArcB Morganella morganii S1
3 group_484 EHELCC_00750 161384 163456 1 cheA chemotaxis protein CheA Morganella morganii S2
4 group_432 EHELCC_01170 258328 261042 -1 rcsD phosphotransferase RcsD Morganella morganii S2
5 group_713 EHELCC_07440 227384 229717 1 arcB aerobic respiration two-component sensor histidine kinase ArcB Morganella morganii S2
6 group_432 NLDBIP_02290 419094 421808 1 rcsD phosphotransferase RcsD Morganella morganii S4
7 group_484 NLDBIP_02710 516680 518752 -1 cheA chemotaxis protein CheA Morganella morganii S4
8 group_713 NLDBIP_07765 227257 229590 1 arcB aerobic respiration two-component sensor histidine kinase ArcB Morganella morganii S4
9 group_432 LHKJJB_03805 26335 29049 1 rcsD phosphotransferase RcsD Morganella morganii S3
10 group_484 LHKJJB_04225 123921 125993 -1 cheA chemotaxis protein CheA Morganella morganii S3
11 group_713 LHKJJB_07300 191003 193336 1 arcB aerobic respiration two-component sensor histidine kinase ArcB Morganella morganii S3
12 group_484 HKOGLL_02820 161589 163661 1 cheA chemotaxis protein CheA Morganella morganii S5
13 group_432 HKOGLL_03240 258533 261247 -1 rcsD phosphotransferase RcsD Morganella morganii S5
14 group_713 HKOGLL_03630 40051 42384 -1 arcB aerobic respiration two-component sensor histidine kinase ArcB Morganella morganii S5
15 group_432 F4V73_RS06355 1320008 1322722 1 rcsD phosphotransferase RcsD Morganella psychrotolerans
16 group_484 F4V73_RS06795 1410338 1412392 -1 cheA chemotaxis protein CheA Morganella psychrotolerans
17 group_713 F4V73_RS11825 519430 521763 1 arcB aerobic respiration two-component sensor histidine kinase ArcB Morganella psychrotolerans
18 group_484 PMI_RS08145 1779883 1782102 -1 cheA chemotaxis protein CheA Proteus mirabilis HI4320
19 group_432 PMI_RS08485 1845004 1847697 1 rcsD phosphotransferase RcsD Proteus mirabilis HI4320
20 group_713 PMI_RS18300 4018571 4020907 1 arcB aerobic respiration two-component sensor histidine kinase ArcB Proteus mirabilis HI4320