PF01551


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01551, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 22 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01551
Description Peptidase family M23

Occurence in the database

PF01551 is associated with 22 different proteins (see tab "Protein list" and "Profile")
The 22 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_640 FBDBKF_02090 105691 107073 1 mepM murein DD-endopeptidase MepM Morganella morganii S1
1 group_2170 FBDBKF_16330 54022 55305 -1 envC Murein hydrolase activator EnvC Morganella morganii S1
2 group_421 FBDBKF_18970 12138 13259 -1 nlpD murein hydrolase activator NlpD Morganella morganii S1
3 group_640 EHELCC_02560 493511 494893 1 mepM murein DD-endopeptidase MepM Morganella morganii S2
4 group_2170 EHELCC_16365 54022 55305 -1 envC Murein hydrolase activator EnvC Morganella morganii S2
5 group_421 EHELCC_18715 12138 13259 -1 nlpD murein hydrolase activator NlpD Morganella morganii S2
6 group_640 NLDBIP_00900 185243 186625 -1 mepM murein DD-endopeptidase MepM Morganella morganii S4
7 group_2170 NLDBIP_16975 6865 8148 1 envC Murein hydrolase activator EnvC Morganella morganii S4
8 group_421 NLDBIP_18590 12254 13375 1 nlpD murein hydrolase activator NlpD Morganella morganii S4
9 group_640 LHKJJB_01135 206060 207442 1 mepM murein DD-endopeptidase MepM Morganella morganii S3
10 group_2170 LHKJJB_16895 9967 11250 1 envC Murein hydrolase activator EnvC Morganella morganii S3
11 group_421 LHKJJB_18585 12138 13259 -1 nlpD murein hydrolase activator NlpD Morganella morganii S3
12 group_640 HKOGLL_01175 211571 212953 1 mepM murein DD-endopeptidase MepM Morganella morganii S5
13 group_2170 HKOGLL_16945 54022 55305 -1 envC Murein hydrolase activator EnvC Morganella morganii S5
14 group_421 HKOGLL_18320 12138 13259 -1 nlpD murein hydrolase activator NlpD Morganella morganii S5
15 group_640 F4V73_RS04455 941703 943061 1 mepM murein DD-endopeptidase MepM Morganella psychrotolerans
16 group_421 F4V73_RS05050 1075935 1076411 1 peptidoglycan DD-metalloendopeptidase family protein Morganella psychrotolerans
17 group_421 F4V73_RS13880 413571 414680 -1 nlpD murein hydrolase activator NlpD Morganella psychrotolerans
18 group_2170 F4V73_RS17250 81217 82428 1 envC murein hydrolase activator EnvC Morganella psychrotolerans
19 group_640 PMI_RS05565 1213205 1214533 1 mepM murein DD-endopeptidase MepM Proteus mirabilis HI4320
20 group_421 PMI_RS11020 2427069 2428193 -1 nlpD murein hydrolase activator NlpD Proteus mirabilis HI4320
21 group_2170 PMI_RS15725 3493643 3494935 -1 envC murein hydrolase activator EnvC Proteus mirabilis HI4320