Orthogroup:group_713



Homologs in group_713

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03095 FBDBKF_03095 Morganella morganii S1 arcB aerobic respiration two-component sensor histidine kinase ArcB
EHELCC_07440 EHELCC_07440 Morganella morganii S2 arcB aerobic respiration two-component sensor histidine kinase ArcB
NLDBIP_07765 NLDBIP_07765 Morganella morganii S4 arcB aerobic respiration two-component sensor histidine kinase ArcB
LHKJJB_07300 LHKJJB_07300 Morganella morganii S3 arcB aerobic respiration two-component sensor histidine kinase ArcB
HKOGLL_03630 HKOGLL_03630 Morganella morganii S5 arcB aerobic respiration two-component sensor histidine kinase ArcB
F4V73_RS11825 F4V73_RS11825 Morganella psychrotolerans arcB aerobic respiration two-component sensor histidine kinase ArcB
PMI_RS18300 PMI_RS18300 Proteus mirabilis HI4320 arcB aerobic respiration two-component sensor histidine kinase ArcB

Distribution of group_713 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_713 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_713

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_713.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 arcB 7

Product

# Product Occurence
1 aerobic respiration two-component sensor histidine kinase ArcB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0642 7 T Signal transduction mechanisms (T) Signal transduction histidine kinase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07648 7 two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] Two-component system
Biofilm formation - Escherichia coli
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Pfam domain Annotation(s)

Domain ID Occurences Description
PF00072 7 Response regulator receiver domain
PF00512 7 His Kinase A (phospho-acceptor) domain
PF00989 1 PAS fold
PF01627 7 Hpt domain
PF02518 7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF08448 6 PAS fold
PF18415 7 Histidine kinase receptor ArcB trans-membrane domain

Annotations of the 574 SwissProt hits

Annotation Number of occurrences
Adaptive-response sensory kinase SasA 22
Adaptive-response sensory-kinase SasA 1
Aerobic respiration control sensor protein ArcB 3
Aerobic respiration control sensor protein ArcB homolog 1
Alginate biosynthesis sensor protein KinB 1
Alkaline phosphatase synthesis sensor protein PhoR 1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1
Alkaline phosphatase synthesis transcriptional regulatory protein SphR 1
Autoinducer 1 sensor kinase/phosphatase LuxN 2
Autoinducer 2 sensor kinase/phosphatase LuxQ 5
Bacteriophytochrome 1
Blue-light-activated protein 3
C4-dicarboxylate transport sensor protein DctB 1
C4-dicarboxylate transport sensor protein DctS 1
CAI-1 autoinducer sensor kinase/phosphatase CqsS 2
Cell cycle response regulator CtrA 9
Cell cycle transcriptional regulator CtrA 2
Cell-division control histidine kinase PdhS 9
Chemotaxis protein CheY 1
Chemotaxis protein CheY-3 2
Circadian input-output histidine kinase CikA 3
Cyanobacterial phytochrome A 1
Cyanobacterial phytochrome B 1
DNA-binding dual master transcriptional regulator RpaA 2
Drug sensory protein A 1
Ethylene receptor 4
Ethylene receptor 1 6
Ethylene receptor 2 5
Ethylene receptor 3 2
Ethylene receptor 4 2
Ethylene response sensor 1 1
Gliding motility regulatory protein 1
Globin-coupled histidine kinase 1
Heme sensor protein HssS 16
Histidine kinase 1 1
Histidine kinase 2 1
Histidine kinase 3 1
Histidine kinase 4 1
Histidine kinase 5 1
Histidine kinase CKI1 1
Histidine kinase P4 1
Histidine protein kinase 1 1
Histidine protein kinase DivJ 1
Histidine protein kinase NIK1 1
Histidine protein kinase SLN1 1
Histidine protein kinase SaeS 12
Hybrid signal transduction histidine kinase A 1
Hybrid signal transduction histidine kinase B 1
Hybrid signal transduction histidine kinase C 1
Hybrid signal transduction histidine kinase D 1
Hybrid signal transduction histidine kinase E 1
Hybrid signal transduction histidine kinase F 1
Hybrid signal transduction histidine kinase G 1
Hybrid signal transduction histidine kinase H 1
Hybrid signal transduction histidine kinase I 1
Hybrid signal transduction histidine kinase J 1
Hybrid signal transduction histidine kinase K 1
Hybrid signal transduction histidine kinase L 1
Hybrid signal transduction histidine kinase M 1
Hybrid signal transduction protein dokA 1
KDP operon transcriptional regulatory protein KdpE 1
Luminescence regulatory protein LuxO 2
Methanogenesis regulatory histidine kinase FilI 1
Nisin biosynthesis sensor protein NisK 1
Nodulation protein V 1
Non-motile and phage-resistance protein 1
Osmolarity two-component system protein SSK1 1
Osmosensing histidine protein kinase SLN1 1
Oxidative stress response two-component system protein SSK1 1
Peroxide stress-activated histidine kinase mak1 1
Peroxide stress-activated histidine kinase mak2 1
Peroxide stress-activated histidine kinase mak3 1
Phosphate regulon sensor protein PhoR 5
Phosphate regulon transcriptional regulatory protein PhoB 1
Phytochrome 3
Phytochrome 1 3
Phytochrome 2 1
Phytochrome A 10
Phytochrome A type 3 1
Phytochrome A type 4 1
Phytochrome A1 1
Phytochrome B 3
Phytochrome B1 1
Phytochrome C 3
Phytochrome a 1
Phytochrome type A 1
Phytochrome-like protein Cph1 1
Polar-differentiation response regulator DivK 9
Probable C4-dicarboxylate sensor kinase 1
Probable ethylene response sensor 1 2
Probable ethylene response sensor 2 2
Probable histidine kinase 1 2
Probable histidine kinase 2 2
Probable histidine kinase 3 2
Probable histidine kinase 4 1
Probable histidine kinase 5 1
Probable histidine kinase 6 1
Probable sensor histidine kinase TcrY 1
Probable sensor kinase SilS 1
Probable sensor protein PcoS 1
Probable transcriptional regulator ycf27 3
Probable transcriptional regulator ycf29 2
Probable transcriptional regulatory protein SYNPCC7002_A0851 1
Probable transcriptional regulatory protein SilR 1
Probable transcriptional regulatory protein TcrX 1
Probable transcriptional regulatory protein y4xI 1
Protein EIN4 1
Protein PilH 1
Protein RcaC 1
Putative sensor protein Sfri_3689 1
Regulator of RpoS 3
Regulatory protein LuxO 4
Regulatory protein VanRB 1
Response regulator ArlR 11
Response regulator MprA 14
Response regulator PleD 2
Response regulator SaeR 12
Response regulator mcs4 1
Response regulator protein CarR 1
Response regulator protein PmrA 1
Response regulator sskA 1
Sensor histidine kinase AruS 1
Sensor histidine kinase AtsR 1
Sensor histidine kinase CheAY 1
Sensor histidine kinase CpxA 2
Sensor histidine kinase CusS 3
Sensor histidine kinase EnvZ 6
Sensor histidine kinase GacS 1
Sensor histidine kinase GlrK 1
Sensor histidine kinase GraS 5
Sensor histidine kinase GtrS 1
Sensor histidine kinase Hik2 2
Sensor histidine kinase HprS 1
Sensor histidine kinase KdpD 1
Sensor histidine kinase MtrB 6
Sensor histidine kinase QseE 1
Sensor histidine kinase RcsC 4
Sensor histidine kinase ResE 1
Sensor histidine kinase RppB 1
Sensor histidine kinase SpaK 1
Sensor histidine kinase SsrA 1
Sensor histidine kinase TmoS 1
Sensor histidine kinase TodS 2
Sensor histidine kinase WalK 1
Sensor histidine kinase YcbM 1
Sensor histidine kinase YclK 1
Sensor histidine kinase YkoH 1
Sensor histidine kinase YvcQ 1
Sensor histidine kinase YvrG 1
Sensor histidine kinase YxdK 1
Sensor histidine kinase ZraS 5
Sensor histidine protein kinase/phosphatase WalK 2
Sensor kinase CckA 1
Sensor protein BceS 2
Sensor protein ChvG 2
Sensor protein CiaH 2
Sensor protein CopS 1
Sensor protein CpxA 2
Sensor protein CreC 1
Sensor protein CutS 2
Sensor protein CzcS 1
Sensor protein DegM 1
Sensor protein DivL 1
Sensor protein EvgS 2
Sensor protein FixL 3
Sensor protein GacS 1
Sensor protein IrlS 2
Sensor protein KdpD 5
Sensor protein PfeS 1
Sensor protein RprX 1
Sensor protein SphS 1
Sensor protein SrrB 8
Sensor protein TdiS 1
Sensor protein TorS 2
Sensor protein VanS 1
Sensor protein VanSB 1
Sensor protein kinase GraS 11
Sensor protein kinase PilS 1
Sensor protein kinase PmrB 1
Sensor protein kinase WalK 18
Sensor protein kinase WalK (Fragment) 2
Sensor-like histidine kinase SenX3 5
Sensor-type histidine kinase PrrB 4
Sensory histidine kinase/phosphatase NtrB 10
Sensory transduction protein RegX3 4
Sensory/regulatory protein RpfC 2
Signal transduction histidine-protein kinase AfsQ2 1
Signal transduction histidine-protein kinase ArlS 13
Signal transduction histidine-protein kinase AtoS 1
Signal transduction histidine-protein kinase BaeS 1
Signal transduction histidine-protein kinase BarA 4
Signal transduction histidine-protein kinase/phosphatase MprB 14
Sporulation kinase A 1
Sporulation kinase B 1
Sporulation kinase C 1
Sporulation kinase D 1
Sporulation kinase E 1
Stress response regulator protein 1 2
Swarming motility regulation sensor protein RssA 1
Transcription factor SKN7 3
Transcription factor prr1 1
Transcriptional activator protein CopR 1
Transcriptional activator protein CzcR 1
Transcriptional regulatory protein BasR 2
Transcriptional regulatory protein CiaR 2
Transcriptional regulatory protein CrdR 1
Transcriptional regulatory protein CusR 3
Transcriptional regulatory protein DltR 2
Transcriptional regulatory protein HprR 1
Transcriptional regulatory protein KdpE 2
Transcriptional regulatory protein PcoR 1
Transcriptional regulatory protein PmrA 1
Transcriptional regulatory protein QseB 5
Transcriptional regulatory protein ResD 1
Transcriptional regulatory protein RprY 1
Transcriptional regulatory protein TcrA 2
Transcriptional regulatory protein TctD 2
Transcriptional regulatory protein TrcR 1
Transcriptional regulatory protein WalR 23
Transcriptional regulatory protein ZraR 2
Two-component response regulator 24 1
Two-component response regulator ARR22 1
Two-component response regulator ORR12 1
Two-component response regulator ORR41 1
Two-component response regulator PhoP 1
Two-component sensor PprA 1
Two-component system protein A 1
Two-component system protein B 1
Uncharacterized 14.6 kDa protein in sodA1 3'region 1
Uncharacterized sensor-like histidine kinase R01002 1
Uncharacterized sensor-like histidine kinase ycf26 2
Uncharacterized transcriptional regulatory protein YcbL 1
Uncharacterized transcriptional regulatory protein YclJ 1
Uncharacterized transcriptional regulatory protein YkoG 1
Uncharacterized transcriptional regulatory protein YrkP 1
Virulence sensor protein BvgS 3
Wide host range VirA protein 3

Protein length

Min length 777
Max length 778
Mean length (sd) 777.1 (0.4)
Median length 777.0

Protein length distribution