PF01527


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01527, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 32 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01527
Description Transposase

Occurence in the database

PF01527 is associated with 32 different proteins (see tab "Protein list" and "Profile")
The 32 proteins are classified into 7 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2786 FBDBKF_08905 163161 163430 -1 tnp IS3 family transposase ORF A Morganella morganii S1
1 group_1935 FBDBKF_14450 88752 88913 -1 Transposase Morganella morganii S1
2 group_163 FBDBKF_14505 97786 98088 1 tnp IS3 family ISPrre1 transposase ORF A Morganella morganii S1
3 group_2786 FBDBKF_16595 1162 1428 -1 tnp IS3 family ISKpn54 transposase ORF A Morganella morganii S1
4 group_163 FBDBKF_17930 24325 24627 1 tnp IS3 family transposase ORF A Morganella morganii S1
5 group_3618 FBDBKF_20280 2613 4157 1 tnp IS3 family IS1353 transposase Morganella morganii S1
6 group_3791 FBDBKF_20520 866 1177 -1 tnp IS3 family ISKpn11 transposase ORF A Morganella morganii S1
7 group_163 EHELCC_06405 11749 12051 -1 tnp IS3 family transposase ORF A Morganella morganii S2
8 group_163 EHELCC_07775 18897 19199 -1 tnp IS3 family ISPrre1 transposase ORF A Morganella morganii S2
9 group_1935 EHELCC_07830 28072 28233 1 Transposase Morganella morganii S2
10 group_2786 EHELCC_12620 295 564 1 tnp IS3 family transposase ORF A Morganella morganii S2
11 group_3618 EHELCC_19090 13003 14547 -1 tnp IS3 family IS1353 transposase Morganella morganii S2
12 group_3791 EHELCC_19840 1413 1724 1 tnp IS3 family ISKpn11 transposase ORF A Morganella morganii S2
13 group_163 NLDBIP_06725 11622 11924 -1 tnp IS3 family transposase ORF A Morganella morganii S4
14 group_163 NLDBIP_08100 18897 19199 -1 tnp IS3 family ISPrre1 transposase ORF A Morganella morganii S4
15 group_1935 NLDBIP_08155 28072 28233 1 Transposase Morganella morganii S4
16 group_2786 NLDBIP_12960 295 564 1 tnp IS3 family transposase ORF A Morganella morganii S4
17 group_3618 NLDBIP_19565 6286 7830 -1 tnp IS3 family IS1353 transposase Morganella morganii S4
18 group_1935 LHKJJB_06110 228926 229087 -1 Transposase Morganella morganii S3
19 group_163 LHKJJB_06165 237960 238262 1 tnp IS3 family ISPrre1 transposase ORF A Morganella morganii S3
20 group_2786 LHKJJB_13595 161879 162148 -1 tnp IS3 family transposase ORF A Morganella morganii S3
21 group_163 LHKJJB_19325 11533 11835 -1 tnp IS3 family transposase ORF A Morganella morganii S3
22 group_3618 LHKJJB_19500 2613 4157 1 tnp IS3 family IS1353 transposase Morganella morganii S3
23 group_163 HKOGLL_04665 257717 258019 1 tnp IS3 family transposase ORF A Morganella morganii S5
24 group_163 HKOGLL_04750 3488 3790 -1 tnp IS3 family ISPrre1 transposase ORF A Morganella morganii S5
25 group_1935 HKOGLL_04805 12663 12824 1 Transposase Morganella morganii S5
26 group_2786 HKOGLL_11435 295 564 1 tnp IS3 family transposase ORF A Morganella morganii S5
27 group_3618 HKOGLL_19445 6286 7830 -1 tnp IS3 family IS1353 transposase Morganella morganii S5
28 group_308 F4V73_RS01605 356068 356320 -1 IS3 family transposase Morganella psychrotolerans
29 group_4170 F4V73_RS16045 15738 16004 -1 transposase Morganella psychrotolerans
30 group_1935 PMI_RS01530 374836 375108 1 transposase Proteus mirabilis HI4320
31 group_1935 PMI_RS04730 1041069 1041227 -1 transposase Proteus mirabilis HI4320