Orthogroup:group_151


Homologs in group_151

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10 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04630 FBDBKF_04630 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_05920 EHELCC_05920 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_06240 NLDBIP_06240 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_03120 LHKJJB_03120 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_06595 HKOGLL_06595 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS01640 F4V73_RS01640 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
F4V73_RS02265 F4V73_RS02265 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
F4V73_RS08420 F4V73_RS08420 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
F4V73_RS09080 F4V73_RS09080 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
F4V73_RS10915 F4V73_RS10915 Morganella psychrotolerans - helix-turn-helix transcriptional regulator

Distribution of group_151 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_151 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_151

Orthogroup content: 10 members

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This page summarizes the annotation of all members of the orthologous group group_151.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 5
2 - 5

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 5
2 helix-turn-helix transcriptional regulator 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 10 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 9 Helix-turn-helix
PF13560 1 Helix-turn-helix domain

Annotations of the 14 SwissProt hits

Annotation Number of occurrences
Putative HTH-type transcriptional regulatory protein PF1851 1
Putative HTH-type transcriptional regulatory protein PH1808 1
Putative HTH-type transcriptional regulatory protein PYRAB03670 1
Repressor protein CI (Fragment) 1
SPbeta prophage-derived uncharacterized HTH-type transcriptional regulator YonR 1
Uncharacterized HTH-type transcriptional regulator R00410 1
Uncharacterized HTH-type transcriptional regulator RC0668 1
Uncharacterized HTH-type transcriptional regulator RP497 1
Uncharacterized HTH-type transcriptional regulator Smed_0045 1
Uncharacterized HTH-type transcriptional regulator YobD 1
Uncharacterized HTH-type transcriptional regulator YqaE 1
Uncharacterized HTH-type transcriptional regulator y4aM 1
Uncharacterized HTH-type transcriptional regulator y4wC 1
Uncharacterized transcriptional regulator in ATPase CF(0) region 1

Protein length

Min length 72
Max length 112
Mean length (sd) 81.3 (13.8)
Median length 72.0

Protein length distribution