PF01103


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF01103
Protein list: lists the 21 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF01103
Description Omp85 superfamily domain

Occurence in the database

PF01103 is associated with 21 different proteins
The 21 proteins are classified into 3 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1121 FBDBKF_05970 18562 20958 -1 bamA outer membrane protein assembly factor BamA Morganella morganii S1
1 group_1438 FBDBKF_08540 87927 89669 1 tamA Outer membrane translocation and assembly module TamA Morganella morganii S1
2 group_2380 FBDBKF_18945 5102 6244 -1 bamA Outer membrane protein assembly factor BamA Morganella morganii S1
3 group_1121 EHELCC_09015 19134 21530 -1 bamA outer membrane protein assembly factor BamA Morganella morganii S2
4 group_1438 EHELCC_12985 74056 75798 -1 tamA Outer membrane translocation and assembly module TamA Morganella morganii S2
5 group_2380 EHELCC_18690 5102 6244 -1 bamA Outer membrane protein assembly factor BamA Morganella morganii S2
6 group_1121 NLDBIP_09395 19134 21530 -1 bamA outer membrane protein assembly factor BamA Morganella morganii S4
7 group_1438 NLDBIP_13325 74056 75798 -1 tamA Outer membrane translocation and assembly module TamA Morganella morganii S4
8 group_2380 NLDBIP_18615 19269 20411 1 bamA Outer membrane protein assembly factor BamA Morganella morganii S4
9 group_1121 LHKJJB_08360 195708 198104 1 bamA outer membrane protein assembly factor BamA Morganella morganii S3
10 group_1438 LHKJJB_13230 86645 88387 1 tamA Outer membrane translocation and assembly module TamA Morganella morganii S3
11 group_2380 LHKJJB_18560 5102 6244 -1 bamA Outer membrane protein assembly factor BamA Morganella morganii S3
12 group_1121 HKOGLL_07910 195708 198104 1 bamA outer membrane protein assembly factor BamA Morganella morganii S5
13 group_1438 HKOGLL_11800 74056 75798 -1 tamA Outer membrane translocation and assembly module TamA Morganella morganii S5
14 group_2380 HKOGLL_18295 5102 6244 -1 bamA Outer membrane protein assembly factor BamA Morganella morganii S5
15 group_1438 F4V73_RS09765 54385 56127 1 autotransporter assembly complex family protein Morganella psychrotolerans
16 group_2380 F4V73_RS13855 405906 407048 -1 BamA/TamA family outer membrane protein Morganella psychrotolerans
17 group_1121 F4V73_RS15925 192318 194711 1 bamA outer membrane protein assembly factor BamA Morganella psychrotolerans
18 group_1121 PMI_RS11245 2474089 2476497 -1 bamA outer membrane protein assembly factor BamA Proteus mirabilis HI4320
19 group_2380 PMI_RS13130 2914458 2915600 1 BamA/TamA family outer membrane protein Proteus mirabilis HI4320
20 group_1438 PMI_RS16875 3714997 3716739 1 autotransporter assembly complex family protein Proteus mirabilis HI4320