PF01103
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF01103
Protein list: lists the 21 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.
Description
External link |
PF01103 |
Description |
Omp85 superfamily domain |
Occurence in the database
PF01103 is associated with 21 different
proteins
|
The 21 proteins are classified into 3 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_1121 |
FBDBKF_05970 |
18562 |
20958 |
-1 |
bamA |
outer membrane protein assembly factor BamA |
Morganella morganii S1 |
1 |
group_1438 |
FBDBKF_08540 |
87927 |
89669 |
1 |
tamA |
Outer membrane translocation and assembly module TamA |
Morganella morganii S1 |
2 |
group_2380 |
FBDBKF_18945 |
5102 |
6244 |
-1 |
bamA |
Outer membrane protein assembly factor BamA |
Morganella morganii S1 |
3 |
group_1121 |
EHELCC_09015 |
19134 |
21530 |
-1 |
bamA |
outer membrane protein assembly factor BamA |
Morganella morganii S2 |
4 |
group_1438 |
EHELCC_12985 |
74056 |
75798 |
-1 |
tamA |
Outer membrane translocation and assembly module TamA |
Morganella morganii S2 |
5 |
group_2380 |
EHELCC_18690 |
5102 |
6244 |
-1 |
bamA |
Outer membrane protein assembly factor BamA |
Morganella morganii S2 |
6 |
group_1121 |
NLDBIP_09395 |
19134 |
21530 |
-1 |
bamA |
outer membrane protein assembly factor BamA |
Morganella morganii S4 |
7 |
group_1438 |
NLDBIP_13325 |
74056 |
75798 |
-1 |
tamA |
Outer membrane translocation and assembly module TamA |
Morganella morganii S4 |
8 |
group_2380 |
NLDBIP_18615 |
19269 |
20411 |
1 |
bamA |
Outer membrane protein assembly factor BamA |
Morganella morganii S4 |
9 |
group_1121 |
LHKJJB_08360 |
195708 |
198104 |
1 |
bamA |
outer membrane protein assembly factor BamA |
Morganella morganii S3 |
10 |
group_1438 |
LHKJJB_13230 |
86645 |
88387 |
1 |
tamA |
Outer membrane translocation and assembly module TamA |
Morganella morganii S3 |
11 |
group_2380 |
LHKJJB_18560 |
5102 |
6244 |
-1 |
bamA |
Outer membrane protein assembly factor BamA |
Morganella morganii S3 |
12 |
group_1121 |
HKOGLL_07910 |
195708 |
198104 |
1 |
bamA |
outer membrane protein assembly factor BamA |
Morganella morganii S5 |
13 |
group_1438 |
HKOGLL_11800 |
74056 |
75798 |
-1 |
tamA |
Outer membrane translocation and assembly module TamA |
Morganella morganii S5 |
14 |
group_2380 |
HKOGLL_18295 |
5102 |
6244 |
-1 |
bamA |
Outer membrane protein assembly factor BamA |
Morganella morganii S5 |
15 |
group_1438 |
F4V73_RS09765 |
54385 |
56127 |
1 |
|
autotransporter assembly complex family protein |
Morganella psychrotolerans |
16 |
group_2380 |
F4V73_RS13855 |
405906 |
407048 |
-1 |
|
BamA/TamA family outer membrane protein |
Morganella psychrotolerans |
17 |
group_1121 |
F4V73_RS15925 |
192318 |
194711 |
1 |
bamA |
outer membrane protein assembly factor BamA |
Morganella psychrotolerans |
18 |
group_1121 |
PMI_RS11245 |
2474089 |
2476497 |
-1 |
bamA |
outer membrane protein assembly factor BamA |
Proteus mirabilis HI4320 |
19 |
group_2380 |
PMI_RS13130 |
2914458 |
2915600 |
1 |
|
BamA/TamA family outer membrane protein |
Proteus mirabilis HI4320 |
20 |
group_1438 |
PMI_RS16875 |
3714997 |
3716739 |
1 |
|
autotransporter assembly complex family protein |
Proteus mirabilis HI4320 |