Homologs in group_2346

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18945 FBDBKF_18945 68.9 Morganella morganii S1 bamA Outer membrane protein assembly factor BamA
EHELCC_18690 EHELCC_18690 68.9 Morganella morganii S2 bamA Outer membrane protein assembly factor BamA
NLDBIP_18615 NLDBIP_18615 68.9 Morganella morganii S4 bamA Outer membrane protein assembly factor BamA
LHKJJB_18560 LHKJJB_18560 68.9 Morganella morganii S3 bamA Outer membrane protein assembly factor BamA
HKOGLL_18295 HKOGLL_18295 68.9 Morganella morganii S5 bamA Outer membrane protein assembly factor BamA
F4V73_RS13855 F4V73_RS13855 65.3 Morganella psychrotolerans - BamA/TamA family outer membrane protein

Distribution of the homologs in the orthogroup group_2346

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2346

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13130
Feature type CDS
Gene -
Product BamA/TamA family outer membrane protein
Location 2914458 - 2915600 (strand: 1)
Length 1143 (nucleotides) / 380 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2346
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01103 Omp85 superfamily domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4775 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein assembly factor BamA

Protein Sequence

MVKTSFIYGLAFASLFISHTANAQLFPDRQQIDQWLNQLGGSNNFDRSKTIDWGVLPGPFYTPELELGLGIAVVGLYQADSRPDSKISSLSLSGFGSSTGAFGMTFSNYTYLADDTWRFYLTGALNNVPTNFWGQGYHEGRVKKNFAQYRSQELHLTPTLLRQITKNTYIGLGWDYANLQAAAPDDEFKAYMSKRHLPLRSTSSGLSVRFTYDSRDFLPNARQGQAFDISYTHYSSDTGSNNRFNATQMQYNYYYPLTEDAVLAFDSYARFTSGDVPWTQLSKLSNGHQMRGYYEGRYQDNHVFSSQIEYRQKLSWRHGIALWAGGGTLSNQARDLGKGHWLPSVGIGYRFEFKPRMNVRLDFGVGKESTGFYFQVGEAF

Flanking regions ( +/- flanking 50bp)

GGATTTAATAATCGTAATAGTTTTCTGTTCTCTGGTGAGTTCCGTTTTTAATGGTTAAAACATCTTTTATTTATGGGCTGGCCTTTGCCAGCCTATTTATTTCACACACAGCGAATGCCCAACTCTTTCCTGATAGACAACAAATCGACCAATGGTTAAATCAACTAGGAGGGAGCAATAATTTTGATCGCAGTAAAACCATCGACTGGGGCGTTTTACCCGGGCCTTTCTATACCCCTGAATTAGAGTTGGGGCTTGGGATCGCCGTTGTTGGGCTTTATCAAGCAGATAGTCGTCCCGACAGTAAAATTTCATCACTGTCATTAAGTGGCTTTGGTTCATCAACCGGGGCTTTTGGTATGACTTTTAGTAACTATACTTACCTTGCTGATGATACATGGCGCTTTTACCTTACTGGGGCATTAAATAATGTGCCGACCAACTTTTGGGGACAAGGCTATCATGAAGGACGAGTTAAAAAGAACTTTGCACAATATCGTTCACAAGAGCTACATTTAACGCCGACATTGCTACGTCAAATTACCAAAAACACCTATATTGGCTTAGGTTGGGATTACGCTAACTTACAAGCAGCAGCACCTGATGATGAGTTTAAAGCCTATATGAGCAAACGTCATTTGCCATTACGCTCTACCAGTTCAGGATTAAGTGTGCGCTTTACCTACGACAGTCGCGATTTTTTGCCTAACGCTCGCCAAGGCCAAGCCTTTGATATTAGCTATACTCATTATTCATCGGATACCGGTAGTAATAACCGTTTTAATGCAACCCAAATGCAGTACAACTATTATTATCCATTAACCGAAGATGCGGTACTCGCCTTTGATAGCTATGCTCGCTTTACCTCAGGAGATGTACCATGGACGCAACTGTCTAAATTAAGCAACGGCCATCAGATGCGTGGCTATTATGAAGGGCGTTATCAAGATAATCATGTTTTTTCTAGTCAGATAGAGTATCGGCAAAAACTTAGTTGGCGTCATGGTATTGCATTATGGGCCGGAGGTGGCACATTGAGTAATCAAGCACGTGATCTCGGTAAAGGACATTGGCTACCCAGTGTTGGTATTGGTTATCGTTTTGAATTTAAACCACGCATGAATGTACGCCTCGATTTTGGTGTCGGTAAAGAGAGCACCGGATTTTATTTCCAAGTGGGTGAGGCATTTTGATGTTAACGCGTTTGGCTATTTTTAATATCATCTTCATATTGATCATTTCA