Orthogroup:group_1121


Homologs in group_1121

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06390 FBDBKF_06390 Morganella morganii S1 exbD TonB system transport protein ExbD
EHELCC_09435 EHELCC_09435 Morganella morganii S2 exbD TonB system transport protein ExbD
NLDBIP_09815 NLDBIP_09815 Morganella morganii S4 exbD TonB system transport protein ExbD
LHKJJB_07940 LHKJJB_07940 Morganella morganii S3 exbD TonB system transport protein ExbD
HKOGLL_07490 HKOGLL_07490 Morganella morganii S5 exbD TonB system transport protein ExbD
F4V73_RS15535 F4V73_RS15535 Morganella psychrotolerans exbD TonB system transport protein ExbD
PMI_RS00145 PMI_RS00145 Proteus mirabilis HI4320 exbD TonB system transport protein ExbD

Distribution of group_1121 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1121 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1121

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1121.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 exbD 7

Product

# Product Occurence
1 TonB system transport protein ExbD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0848 7 U Intracellular trafficking, secretion, and vesicular transport (U) Biopolymer transport protein ExbD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03559 7 biopolymer transport protein ExbD - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02472 7 Biopolymer transport protein ExbD/TolR

Annotations of the 28 SwissProt hits

Annotation Number of occurrences
Biopolymer transport protein ExbD 16
Biopolymer transport protein exbD1 2
Biopolymer transport protein exbD2 3
Putative biopolymer transport protein ExbD 1
Putative biopolymer transport protein ExbD-like 1 2
Putative biopolymer transport protein ExbD-like 2 2
Tol-Pal system protein TolR 2

Protein length

Min length 140
Max length 142
Mean length (sd) 140.3 (0.8)
Median length 140.0

Protein length distribution