Homologs in group_1382

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08540 FBDBKF_08540 69.7 Morganella morganii S1 tamA Outer membrane translocation and assembly module TamA
EHELCC_12985 EHELCC_12985 69.7 Morganella morganii S2 tamA Outer membrane translocation and assembly module TamA
NLDBIP_13325 NLDBIP_13325 69.7 Morganella morganii S4 tamA Outer membrane translocation and assembly module TamA
LHKJJB_13230 LHKJJB_13230 69.7 Morganella morganii S3 tamA Outer membrane translocation and assembly module TamA
HKOGLL_11800 HKOGLL_11800 69.7 Morganella morganii S5 tamA Outer membrane translocation and assembly module TamA
F4V73_RS09765 F4V73_RS09765 69.3 Morganella psychrotolerans - autotransporter assembly complex family protein

Distribution of the homologs in the orthogroup group_1382

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1382

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
D2TN56 0.0 761 62 2 580 1 tamA Translocation and assembly module subunit TamA Citrobacter rodentium (strain ICC168)
P0ADE4 0.0 761 62 3 576 1 tamA Translocation and assembly module subunit TamA Escherichia coli (strain K12)
P0ADE5 0.0 761 62 3 576 3 tamA Translocation and assembly module subunit TamA Escherichia coli O157:H7
E1WAU4 0.0 753 61 2 580 3 tamA Translocation and assembly module subunit TamA Salmonella typhimurium (strain SL1344)
P44038 2.01e-159 471 41 6 573 1 tama Translocation and assembly module subunit TamA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q729H8 4.85e-05 50 33 4 110 3 bamA Outer membrane protein assembly factor BamA Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
Q7N8N9 0.000586 46 21 24 520 3 bamA Outer membrane protein assembly factor BamA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B1JQG8 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q667J7 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TL83 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis (strain Pestoides F)
Q1CFF5 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Nepal516)
A9R388 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Angola)
Q8ZH58 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis
B2JZ26 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CAM6 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Antiqua)
A7FFH7 0.000627 46 24 7 212 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16875
Feature type CDS
Gene -
Product autotransporter assembly complex family protein
Location 3714997 - 3716739 (strand: 1)
Length 1743 (nucleotides) / 580 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1382
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01103 Omp85 superfamily domain
PF07244 Surface antigen variable number repeat
PF17243 POTRA domain TamA domain 1

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0729 Cell wall/membrane/envelope biogenesis (M) M Outer membrane translocation and assembly module TamA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07278 translocation and assembly module TamA - -

Protein Sequence

MPRYSVIYVLCLSSITSFAYGANLRLKVEGLEGQLEKNVRVQLSNITTEEVAPDGRFRARVEKAIKEGLRPLGYYQPTVTFSYQENTPPTRPVLTAKVELGIPVLLKGVNIVLEGGAKTDEQYAKVIKENTPPLDSVLNHAEYEKLKGSLTGLAIRRGYFDADMEKSQLGVSLDNHASYWDFVFNSGERYRFGKVNYTGSQIREDYLQNIVPFKEGEYYSSEDLAEFNRRLAATGWFNSAVVTPNIAKARSEGNYLLPMDAVVTPRSRNYMELGGGFATDVGPRLNMQWDKPWINSRGHSLTSNMSISKPEQSIGANYKIPLKVNPLEQYYGIQSGYKRTDLNDTRSDTTTLNVSRNWDMSTGWQYSINTRWSLSHFTQGDVTNTTMLLYPGANASRVRQRGGMMPYWGDSQRYSVDYSNKIWGSDVEFLALQAQQVWIRTPWEGHRFVVRGTFGWIETNQFEKVPPELRFFAGGDRSIRGYKYQSISPEDSKGKLTGASRMLTGSAEYQYNVTGNWWGAVFVDSGEAVNDFTKSDFKTGAGAGVRWASPVGPVKFDLAVPVNSGEERKLQFYIGLGAEL

Flanking regions ( +/- flanking 50bp)

ACTATTTGTCGTCAATTACCGAATGATATAAATAATATTGAGGAGAAAACGTGCCGAGATACTCCGTTATCTACGTTCTCTGTCTGTCTTCTATAACGTCTTTTGCTTATGGGGCAAATTTACGTTTAAAAGTAGAAGGTTTAGAAGGGCAACTCGAAAAGAATGTACGAGTCCAGCTATCAAACATAACAACAGAAGAAGTTGCACCAGACGGGCGTTTTCGTGCGCGTGTTGAAAAGGCAATTAAAGAGGGCCTACGGCCTTTAGGTTATTATCAGCCAACGGTCACTTTCTCTTATCAAGAAAATACCCCTCCGACACGCCCTGTATTAACAGCAAAGGTTGAGCTTGGTATTCCCGTACTGTTAAAAGGGGTCAATATTGTACTGGAAGGGGGAGCTAAAACAGATGAACAATATGCCAAAGTGATTAAAGAAAACACTCCCCCTCTTGATAGTGTGTTAAATCATGCCGAATATGAAAAATTAAAAGGCTCGTTAACAGGGCTTGCTATTCGTCGTGGTTACTTTGATGCAGATATGGAAAAAAGCCAGCTCGGTGTCTCTTTAGATAATCACGCCTCTTATTGGGATTTTGTCTTTAATAGTGGTGAACGTTACCGTTTTGGTAAAGTGAATTATACTGGCTCACAAATTCGTGAAGACTACCTACAAAATATTGTGCCTTTTAAAGAAGGGGAATATTACTCTTCTGAAGATTTGGCAGAGTTTAATCGACGCTTAGCTGCCACAGGATGGTTTAATTCGGCGGTTGTCACACCTAATATCGCTAAAGCACGTAGTGAAGGCAATTATTTGCTACCAATGGATGCCGTTGTTACCCCTCGTTCACGTAACTATATGGAGCTAGGGGGCGGTTTTGCCACAGATGTCGGACCTCGATTAAATATGCAGTGGGATAAACCTTGGATAAATTCTAGGGGCCATAGTTTAACATCGAATATGAGTATTTCTAAGCCTGAGCAATCTATTGGTGCTAATTATAAAATTCCATTAAAAGTTAACCCATTAGAACAATATTATGGCATTCAAAGCGGCTATAAACGTACAGATTTAAATGATACTCGTTCGGATACCACCACACTGAACGTTTCTCGTAACTGGGATATGTCAACGGGATGGCAATACAGTATTAATACCCGCTGGAGTCTGAGCCACTTTACCCAAGGTGATGTGACCAATACAACCATGTTGCTTTATCCTGGTGCGAATGCAAGTCGCGTACGCCAACGGGGTGGCATGATGCCTTATTGGGGGGATAGCCAACGTTATTCAGTCGATTATTCCAATAAAATATGGGGATCTGATGTTGAATTTCTCGCACTACAAGCTCAGCAAGTGTGGATACGCACACCTTGGGAAGGCCACCGTTTTGTGGTCAGAGGGACGTTTGGCTGGATTGAAACGAATCAATTTGAGAAAGTACCACCCGAATTACGTTTCTTTGCTGGTGGCGATAGAAGTATTAGGGGTTATAAATACCAAAGTATTTCACCGGAAGATAGCAAAGGTAAATTAACAGGGGCATCAAGAATGCTAACGGGATCTGCTGAATACCAATATAACGTAACTGGAAATTGGTGGGGAGCTGTATTTGTTGATAGTGGTGAAGCCGTTAACGATTTTACGAAAAGTGATTTTAAAACAGGTGCTGGTGCGGGGGTTCGTTGGGCATCTCCAGTCGGGCCTGTAAAGTTTGATTTAGCCGTTCCAGTCAATAGTGGTGAAGAGCGTAAGTTACAGTTTTATATTGGGTTAGGAGCTGAGTTATGATGAAGTGGTTGAAAAGGATAACACTAACGCTACTTATCATCATTTTACTG