Homologs in group_1054

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05970 FBDBKF_05970 94.7 Morganella morganii S1 bamA outer membrane protein assembly factor BamA
EHELCC_09015 EHELCC_09015 94.7 Morganella morganii S2 bamA outer membrane protein assembly factor BamA
NLDBIP_09395 NLDBIP_09395 94.7 Morganella morganii S4 bamA outer membrane protein assembly factor BamA
LHKJJB_08360 LHKJJB_08360 94.7 Morganella morganii S3 bamA outer membrane protein assembly factor BamA
HKOGLL_07910 HKOGLL_07910 94.7 Morganella morganii S5 bamA outer membrane protein assembly factor BamA
PMI_RS11245 PMI_RS11245 80.4 Proteus mirabilis HI4320 bamA outer membrane protein assembly factor BamA

Distribution of the homologs in the orthogroup group_1054

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1054

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9S341 0.0 1382 81 0 797 3 bamA Outer membrane protein assembly factor BamA Photorhabdus luminescens
Q7N8N9 0.0 1375 80 0 797 3 bamA Outer membrane protein assembly factor BamA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B1JQG8 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q667J7 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TL83 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis (strain Pestoides F)
Q1CFF5 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Nepal516)
A9R388 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Angola)
Q8ZH58 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis
B2JZ26 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CAM6 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Antiqua)
A7FFH7 0.0 1318 77 1 797 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A8GID8 0.0 1307 77 2 803 3 bamA Outer membrane protein assembly factor BamA Serratia proteamaculans (strain 568)
A7MGT7 0.0 1287 76 2 804 3 bamA Outer membrane protein assembly factor BamA Cronobacter sakazakii (strain ATCC BAA-894)
C5B7R5 0.0 1283 75 2 798 3 bamA Outer membrane protein assembly factor BamA Edwardsiella ictaluri (strain 93-146)
D5CHY0 0.0 1282 75 2 805 1 bamA Outer membrane protein assembly factor BamA Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
A4W6S2 0.0 1267 75 3 805 3 bamA Outer membrane protein assembly factor BamA Enterobacter sp. (strain 638)
B4TYD7 0.0 1265 74 3 813 3 bamA Outer membrane protein assembly factor BamA Salmonella schwarzengrund (strain CVM19633)
B4SV06 0.0 1265 74 3 813 3 bamA Outer membrane protein assembly factor BamA Salmonella newport (strain SL254)
B5RHG2 0.0 1265 74 3 813 3 bamA Outer membrane protein assembly factor BamA Salmonella gallinarum (strain 287/91 / NCTC 13346)
A8ALB1 0.0 1264 74 3 812 3 bamA Outer membrane protein assembly factor BamA Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A9MPI4 0.0 1264 74 4 813 3 bamA Outer membrane protein assembly factor BamA Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q3Z5I1 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Shigella sonnei (strain Ss046)
P0A943 0.0 1263 74 4 813 2 bamA Outer membrane protein assembly factor BamA Shigella flexneri
Q0T832 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Shigella flexneri serotype 5b (strain 8401)
Q325W3 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Shigella boydii serotype 4 (strain Sb227)
B2U320 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1RG12 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain UTI89 / UPEC)
B6HZF1 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain SE11)
B7N844 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A940 0.0 1263 74 4 813 1 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12)
B1IQG4 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A941 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLF6 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A7ZWC3 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O9:H4 (strain HS)
B1XD46 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12 / DH10B)
C4ZRR9 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12 / MC4100 / BW2952)
B7M1Y0 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O8 (strain IAI1)
B7NID9 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5Z0F6 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A942 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O157:H7
B7LGN8 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain 55989 / EAEC)
B7MBF8 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UIM2 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZHR7 0.0 1263 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O139:H28 (strain E24377A / ETEC)
B7LW74 0.0 1261 75 3 809 3 bamA Outer membrane protein assembly factor BamA Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A1A7M1 0.0 1261 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O1:K1 / APEC
Q32JT2 0.0 1261 74 4 813 3 bamA Outer membrane protein assembly factor BamA Shigella dysenteriae serotype 1 (strain Sd197)
A9N0S6 0.0 1261 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B5R3J0 0.0 1261 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella enteritidis PT4 (strain P125109)
B5FJ24 0.0 1261 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella dublin (strain CT_02021853)
B1LGX9 0.0 1261 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain SMS-3-5 / SECEC)
B7MP37 0.0 1261 74 4 813 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O81 (strain ED1a)
C6DAJ1 0.0 1260 74 2 809 3 bamA Outer membrane protein assembly factor BamA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D8D5 0.0 1260 73 2 814 3 bamA Outer membrane protein assembly factor BamA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q8ZRP0 0.0 1259 74 3 809 1 bamA Outer membrane protein assembly factor BamA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B5BAN4 0.0 1259 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi A (strain AKU_12601)
Q5PD65 0.0 1259 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z9A3 0.0 1259 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella typhi
C0Q6K0 0.0 1259 74 3 810 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi C (strain RKS4594)
B5F8T8 0.0 1259 75 4 809 3 bamA Outer membrane protein assembly factor BamA Salmonella agona (strain SL483)
Q57T31 0.0 1258 74 3 810 3 bamA Outer membrane protein assembly factor BamA Salmonella choleraesuis (strain SC-B67)
B5Y1J4 0.0 1255 74 3 812 3 bamA Outer membrane protein assembly factor BamA Klebsiella pneumoniae (strain 342)
B4TK52 0.0 1254 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella heidelberg (strain SL476)
A6T4X9 0.0 1252 73 3 812 3 bamA Outer membrane protein assembly factor BamA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B2VE18 0.0 1249 74 2 803 3 bamA Outer membrane protein assembly factor BamA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q2NRL5 0.0 1207 72 3 808 3 bamA Outer membrane protein assembly factor BamA Sodalis glossinidius (strain morsitans)
P46024 0.0 702 45 9 804 1 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae
O32629 0.0 698 44 9 801 3 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae
P44935 0.0 696 44 9 805 1 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8K9S5 0.0 618 37 3 804 3 bamA Outer membrane protein assembly factor BamA Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9K1H0 6.49e-151 464 34 13 815 1 bamA Outer membrane protein assembly factor BamA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P57331 2.1e-133 412 35 0 543 3 bamA Outer membrane protein assembly factor BamA Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q729H8 3.58e-41 165 25 25 807 3 bamA Outer membrane protein assembly factor BamA Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
C6V5K2 3.33e-39 159 22 18 774 3 bamA Outer membrane protein assembly factor BamA Neorickettsia risticii (strain Illinois)
O83346 1.82e-21 103 23 14 529 1 tp92 Putative outer membrane protein assembly factor TP_0326 Treponema pallidum (strain Nichols)
O25369 3.34e-21 103 24 7 441 3 bamA Outer membrane protein assembly factor BamA Helicobacter pylori (strain ATCC 700392 / 26695)
O25369 0.000121 49 27 8 174 3 bamA Outer membrane protein assembly factor BamA Helicobacter pylori (strain ATCC 700392 / 26695)
Q5U3I0 7.6e-14 78 24 19 494 2 samm50b Sorting and assembly machinery component 50 homolog B Danio rerio
Q6AXV4 1.07e-13 77 25 19 475 1 Samm50 Sorting and assembly machinery component 50 homolog Rattus norvegicus
Q7ZWS5 1.17e-12 74 24 19 474 2 samm50-a Sorting and assembly machinery component 50 homolog A Xenopus laevis
Q8BGH2 1.46e-12 74 24 16 469 1 Samm50 Sorting and assembly machinery component 50 homolog Mus musculus
Q6P806 2.22e-12 73 24 20 475 2 samm50 Sorting and assembly machinery component 50 homolog Xenopus tropicalis
Q6PA35 3.02e-12 73 24 19 474 2 samm50-b Sorting and assembly machinery component 50 homolog B Xenopus laevis
Q803G5 3.17e-12 73 24 20 500 2 samm50a Sorting and assembly machinery component 50 homolog A Danio rerio
Q9Y512 9.66e-12 71 24 17 492 1 SAMM50 Sorting and assembly machinery component 50 homolog Homo sapiens
Q2HJ55 9.33e-11 68 23 18 479 2 SAMM50 Sorting and assembly machinery component 50 homolog Bos taurus
P44038 1.89e-10 68 22 24 593 1 tama Translocation and assembly module subunit TamA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
E1WAU4 5.77e-09 63 23 26 570 3 tamA Translocation and assembly module subunit TamA Salmonella typhimurium (strain SL1344)
D2TN56 4.37e-08 60 22 27 593 1 tamA Translocation and assembly module subunit TamA Citrobacter rodentium (strain ICC168)
Q10478 7.41e-07 56 26 4 164 3 SPAC17C9.06 SAM50-like protein SPAC17C9.06 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0ADE4 6.84e-06 53 22 24 569 1 tamA Translocation and assembly module subunit TamA Escherichia coli (strain K12)
P0ADE5 6.84e-06 53 22 24 569 3 tamA Translocation and assembly module subunit TamA Escherichia coli O157:H7
P53969 0.000132 48 26 7 155 1 SAM50 Sorting assembly machinery 50 kDa subunit Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15925
Feature type CDS
Gene bamA
Product outer membrane protein assembly factor BamA
Location 192318 - 194711 (strand: 1)
Length 2394 (nucleotides) / 797 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1054
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01103 Omp85 superfamily domain
PF07244 Surface antigen variable number repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4775 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein assembly factor BamA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07277 outer membrane protein insertion porin family Mitophagy - animal -

Protein Sequence

MAMKKLLIASLLLGSFTAYGSDGFVVQDIQFEGLQRVAVGAALLNMPVRVGDTASDEDIGRTIRALFATGNFEDVRVLRDGNALLVQVKERPTIANITFSGNKSVKDDMLKQNLEASNIRVGEALDRTMLANIEKGLEDFYHSVGKYNATVKAVVTPLPRNRIDVKFVFAEGVSATIQQINIVGNDTFTTAELVNRFQLRDDVPWWNLAADQKYQKQKLAGDLETLRSFYLDRGYAKFNIDSTQVSLTPDKKGIYITVNVTEGEQYQIAGVQVAGETAGHSAEITELTMIEPGSLYNGTQVTKMENDVKNMLGRYGYAYPRVMTQPEINEADKTVTLHVNVDAGNRFYVRQIRFAGNDVSKDSVLRREMRQMEGAWLGNDLVETGKERLNRTGFFETVEVETQRVPGVPDQVDVVYKVKERNTGSLNFGVGFGTESGVSFQVGVTQDNWLGTGYQVAANASKNDYSTYAELSLTDPYFTVDGVSLGGRIFYNDFRADDADLSGYTNKTYGVDGTLGFPVNENNSFRLGLGYVHNTLSRMEPQVAMWRYLESMGETPGFEGREEFRADDFTLTTAWVYNNLDRGFFPTSGVKSTVSAKVTVPGSDNEYYKLIADTTGYYPIDDNNSWVVMGRGRLGFGDGLGGKELPFYENFYAGGSGTVRGFRSNTIGPKAIYLDSSGTPKSDSPSRDAIGGNAMAVASLELITPTPFIDEKYTNSVRTSLFVDAGTVWDTNWDNTAEMQKLGIPDYSKAGNIRVSSGVALQWISPLGPLVFSYARPIKDYEGDRTEQFQFNIGKTW

Flanking regions ( +/- flanking 50bp)

CTCCCGCTTCTGAAGAAGCAGGGGACCGGTAAGGAAAACGCATAACAACGATGGCGATGAAAAAGTTGCTCATAGCGTCGCTGCTGCTTGGCAGCTTCACTGCATACGGTTCAGACGGATTCGTGGTTCAGGACATTCAGTTTGAAGGTCTTCAGCGCGTCGCCGTTGGTGCTGCATTACTGAACATGCCTGTTCGTGTCGGAGACACGGCCAGTGACGAAGATATCGGTCGTACCATTCGCGCACTCTTCGCGACAGGTAACTTTGAAGATGTCCGCGTCCTGCGTGATGGTAATGCATTGCTGGTTCAGGTAAAAGAACGTCCGACCATTGCAAATATTACTTTCTCGGGCAATAAATCCGTGAAGGATGACATGCTCAAACAGAATCTGGAAGCCTCCAACATCCGTGTTGGTGAAGCGCTTGACCGGACGATGTTGGCAAACATTGAAAAGGGGCTGGAAGATTTCTATCACAGTGTCGGTAAATACAATGCGACAGTTAAAGCCGTTGTAACACCGCTTCCGCGTAACCGTATTGATGTTAAATTTGTTTTCGCTGAAGGGGTTTCTGCCACTATTCAGCAAATCAATATCGTGGGTAACGACACGTTTACTACCGCAGAACTGGTGAACCGTTTCCAGCTGCGTGATGATGTACCGTGGTGGAACCTGGCGGCTGACCAGAAGTACCAGAAACAAAAACTGGCTGGTGACCTTGAAACGTTACGCAGCTTTTATCTGGATCGCGGTTACGCCAAATTTAATATTGATTCGACTCAGGTCAGTCTGACACCGGATAAAAAAGGCATTTATATCACGGTTAACGTGACCGAAGGCGAGCAGTATCAGATTGCCGGCGTTCAGGTTGCCGGTGAAACAGCCGGACATTCTGCTGAAATCACCGAACTGACCATGATTGAGCCGGGCTCACTCTATAATGGTACGCAAGTCACCAAGATGGAGAATGATGTCAAAAATATGCTTGGCCGTTATGGCTATGCTTATCCGCGCGTCATGACTCAGCCGGAAATTAATGAAGCAGATAAAACCGTTACACTGCATGTCAATGTAGATGCCGGTAACCGTTTCTATGTCCGCCAGATCCGTTTTGCCGGTAATGACGTGAGTAAAGACTCCGTTCTGCGCCGTGAAATGCGTCAGATGGAAGGTGCGTGGTTAGGTAATGACCTGGTGGAAACCGGGAAAGAGCGCCTGAACCGTACCGGTTTCTTTGAAACCGTCGAAGTGGAAACTCAGCGTGTACCGGGCGTGCCGGATCAGGTTGATGTTGTCTATAAAGTCAAAGAGCGAAACACCGGTTCCCTGAACTTTGGTGTGGGCTTCGGGACAGAAAGCGGCGTCAGCTTCCAGGTCGGTGTGACTCAGGATAACTGGTTAGGTACGGGTTATCAGGTTGCAGCTAACGCCAGCAAAAATGACTACTCCACTTACGCGGAACTGTCACTGACAGACCCGTACTTCACGGTGGATGGTGTGAGCCTGGGTGGTCGTATTTTCTATAACGACTTCCGTGCTGATGATGCAGACCTGTCCGGCTATACCAATAAAACCTATGGTGTGGACGGAACACTCGGCTTCCCTGTCAACGAAAACAACTCATTCCGTTTAGGTCTGGGCTACGTGCATAATACCCTGTCCCGTATGGAGCCACAGGTTGCTATGTGGCGCTACCTGGAATCAATGGGTGAGACTCCGGGCTTTGAAGGTCGTGAAGAATTCCGTGCGGATGACTTCACCCTTACCACTGCATGGGTGTACAACAACCTTGACCGCGGGTTCTTCCCGACGTCCGGGGTGAAATCCACCGTCAGTGCGAAAGTGACAGTGCCGGGCTCTGATAACGAATACTACAAGCTGATCGCCGATACCACCGGTTATTATCCGATTGATGATAATAACAGTTGGGTTGTGATGGGACGTGGTCGTTTAGGCTTTGGTGACGGACTCGGCGGCAAAGAACTGCCGTTCTATGAGAACTTCTATGCAGGGGGTTCCGGTACTGTTCGTGGCTTCCGCTCCAATACTATTGGTCCGAAAGCGATTTATCTGGATAGTAGCGGTACACCGAAATCAGACAGTCCGTCGCGTGATGCTATCGGCGGTAACGCAATGGCAGTGGCCAGCCTTGAGCTGATTACGCCAACACCGTTTATCGACGAGAAATACACAAACTCTGTCCGGACATCTCTGTTTGTGGATGCTGGTACAGTGTGGGATACCAACTGGGATAATACGGCAGAAATGCAAAAACTTGGTATTCCGGATTACAGCAAAGCAGGAAATATTCGTGTCTCCTCCGGTGTCGCGCTTCAGTGGATTTCTCCGCTCGGGCCGTTGGTCTTCTCTTATGCAAGACCAATCAAAGACTACGAGGGTGACCGTACCGAACAGTTCCAGTTTAATATCGGTAAGACCTGGTAATTACGATACCCGATGTCATTCGGAATGCAGGCAACGAACCTGCAGTCTGA