PF01075


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01075, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 29 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01075
Description Glycosyltransferase family 9 (heptosyltransferase)

Occurence in the database

PF01075 is associated with 29 different proteins (see tab "Protein list" and "Profile")
The 29 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_403 FBDBKF_16285 44461 45534 1 rfaQ putative lipopolysaccharide heptosyltransferase III Morganella morganii S1
1 group_2168 FBDBKF_16305 48771 49748 -1 rfaC lipopolysaccharide heptosyltransferase RfaC Morganella morganii S1
2 group_2169 FBDBKF_16310 49733 50794 -1 rfaF ADP-heptose--LPS heptosyltransferase RfaF Morganella morganii S1
3 group_2247 FBDBKF_17185 20421 21545 1 rfaF ADP-heptose:LPS heptosyltransferase Morganella morganii S1
4 group_2247 EHELCC_01705 333956 335080 -1 rfaF ADP-heptose:LPS heptosyltransferase Morganella morganii S2
5 group_403 EHELCC_16320 44461 45534 1 rfaQ putative lipopolysaccharide heptosyltransferase III Morganella morganii S2
6 group_2168 EHELCC_16340 48771 49748 -1 rfaC lipopolysaccharide heptosyltransferase RfaC Morganella morganii S2
7 group_2169 EHELCC_16345 49733 50794 -1 rfaF ADP-heptose--LPS heptosyltransferase RfaF Morganella morganii S2
8 group_2247 NLDBIP_01755 345056 346180 1 rfaF ADP-heptose:LPS heptosyltransferase Morganella morganii S4
9 group_2169 NLDBIP_16995 11376 12437 1 rfaF ADP-heptose--LPS heptosyltransferase RfaF Morganella morganii S4
10 group_2168 NLDBIP_17000 12422 13399 1 rfaC lipopolysaccharide heptosyltransferase RfaC Morganella morganii S4
11 group_403 NLDBIP_17020 16636 17709 -1 rfaQ putative lipopolysaccharide heptosyltransferase III Morganella morganii S4
12 group_2247 LHKJJB_00280 46505 47629 -1 rfaF ADP-heptose:LPS heptosyltransferase Morganella morganii S3
13 group_2169 LHKJJB_16915 14478 15539 1 rfaF ADP-heptose--LPS heptosyltransferase RfaF Morganella morganii S3
14 group_2168 LHKJJB_16920 15524 16501 1 rfaC lipopolysaccharide heptosyltransferase RfaC Morganella morganii S3
15 group_403 LHKJJB_16940 19738 20811 -1 rfaQ putative lipopolysaccharide heptosyltransferase III Morganella morganii S3
16 group_2247 HKOGLL_00320 52016 53140 -1 rfaF ADP-heptose:LPS heptosyltransferase Morganella morganii S5
17 group_403 HKOGLL_16900 44461 45534 1 rfaQ putative lipopolysaccharide heptosyltransferase III Morganella morganii S5
18 group_2168 HKOGLL_16920 48771 49748 -1 rfaC lipopolysaccharide heptosyltransferase RfaC Morganella morganii S5
19 group_2169 HKOGLL_16925 49733 50794 -1 rfaF ADP-heptose--LPS heptosyltransferase RfaF Morganella morganii S5
20 group_2247 F4V73_RS05940 1264511 1265608 1 glycosyltransferase family 9 protein Morganella psychrotolerans
21 group_2169 F4V73_RS17280 88498 89559 1 rfaF ADP-heptose--LPS heptosyltransferase RfaF Morganella psychrotolerans
22 group_2168 F4V73_RS17285 89544 90521 1 rfaC lipopolysaccharide heptosyltransferase RfaC Morganella psychrotolerans
23 group_403 F4V73_RS17305 93755 94828 -1 rfaQ putative lipopolysaccharide heptosyltransferase III Morganella psychrotolerans
24 group_403 PMI_RS15625 3472089 3473090 1 glycosyltransferase family 9 protein Proteus mirabilis HI4320
25 group_403 PMI_RS15665 3480328 3481392 1 rfaQ putative lipopolysaccharide heptosyltransferase III Proteus mirabilis HI4320
26 group_2247 PMI_RS15685 3484614 3485675 1 glycosyltransferase family 9 protein Proteus mirabilis HI4320
27 group_2168 PMI_RS15695 3486674 3487636 -1 rfaC lipopolysaccharide heptosyltransferase RfaC Proteus mirabilis HI4320
28 group_2169 PMI_RS15700 3487633 3488685 -1 rfaF ADP-heptose--LPS heptosyltransferase RfaF Proteus mirabilis HI4320