PF00899
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00899, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 21 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF00899 |
Description |
ThiF family |
Occurence in the database
PF00899 is associated with 21 different proteins (see tab "Protein list" and "Profile") |
The 21 proteins are classified into 3 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_1078 |
FBDBKF_06115 |
46167 |
46985 |
-1 |
tcdA |
tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA |
Morganella morganii S1 |
1 |
group_1174 |
FBDBKF_06760 |
16694 |
17467 |
-1 |
moeB |
molybdopterin-synthase adenylyltransferase MoeB |
Morganella morganii S1 |
2 |
group_2294 |
FBDBKF_17625 |
20404 |
21162 |
-1 |
thiF |
Molybdopterin or thiamine biosynthesis adenylyltransferase |
Morganella morganii S1 |
3 |
group_1174 |
EHELCC_04210 |
168719 |
169492 |
1 |
moeB |
molybdopterin-synthase adenylyltransferase MoeB |
Morganella morganii S2 |
4 |
group_1078 |
EHELCC_09160 |
46739 |
47557 |
-1 |
tcdA |
tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA |
Morganella morganii S2 |
5 |
group_2294 |
EHELCC_18110 |
19780 |
20538 |
-1 |
thiF |
Molybdopterin or thiamine biosynthesis adenylyltransferase |
Morganella morganii S2 |
6 |
group_1174 |
NLDBIP_04210 |
168515 |
169288 |
1 |
moeB |
molybdopterin-synthase adenylyltransferase MoeB |
Morganella morganii S4 |
7 |
group_1078 |
NLDBIP_09540 |
46739 |
47557 |
-1 |
tcdA |
tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA |
Morganella morganii S4 |
8 |
group_2294 |
NLDBIP_18040 |
18199 |
18957 |
1 |
thiF |
Molybdopterin or thiamine biosynthesis adenylyltransferase |
Morganella morganii S4 |
9 |
group_1078 |
LHKJJB_08215 |
169681 |
170499 |
1 |
tcdA |
tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA |
Morganella morganii S3 |
10 |
group_1174 |
LHKJJB_10040 |
168629 |
169402 |
1 |
moeB |
molybdopterin-synthase adenylyltransferase MoeB |
Morganella morganii S3 |
11 |
group_2294 |
LHKJJB_18235 |
18199 |
18957 |
1 |
thiF |
Molybdopterin or thiamine biosynthesis adenylyltransferase |
Morganella morganii S3 |
12 |
group_1078 |
HKOGLL_07765 |
169681 |
170499 |
1 |
tcdA |
tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA |
Morganella morganii S5 |
13 |
group_1174 |
HKOGLL_08935 |
21650 |
22423 |
-1 |
moeB |
molybdopterin-synthase adenylyltransferase MoeB |
Morganella morganii S5 |
14 |
group_2294 |
HKOGLL_17965 |
19780 |
20538 |
-1 |
thiF |
Molybdopterin or thiamine biosynthesis adenylyltransferase |
Morganella morganii S5 |
15 |
group_1174 |
F4V73_RS00910 |
193293 |
194066 |
-1 |
moeB |
molybdopterin-synthase adenylyltransferase MoeB |
Morganella psychrotolerans |
16 |
group_2294 |
F4V73_RS15005 |
239039 |
239797 |
-1 |
|
HesA/MoeB/ThiF family protein |
Morganella psychrotolerans |
17 |
group_1078 |
F4V73_RS15800 |
167405 |
168220 |
1 |
tcdA |
tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA |
Morganella psychrotolerans |
18 |
group_1174 |
PMI_RS03135 |
691702 |
692469 |
-1 |
moeB |
molybdopterin-synthase adenylyltransferase MoeB |
Proteus mirabilis HI4320 |
19 |
group_1078 |
PMI_RS11380 |
2504070 |
2504918 |
-1 |
tcdA |
tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA |
Proteus mirabilis HI4320 |
20 |
group_2294 |
PMI_RS13725 |
3049296 |
3050045 |
1 |
|
HesA/MoeB/ThiF family protein |
Proteus mirabilis HI4320 |