PF00899


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00899, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00899
Description ThiF family

Occurence in the database

PF00899 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1078 FBDBKF_06115 46167 46985 -1 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA Morganella morganii S1
1 group_1174 FBDBKF_06760 16694 17467 -1 moeB molybdopterin-synthase adenylyltransferase MoeB Morganella morganii S1
2 group_2294 FBDBKF_17625 20404 21162 -1 thiF Molybdopterin or thiamine biosynthesis adenylyltransferase Morganella morganii S1
3 group_1174 EHELCC_04210 168719 169492 1 moeB molybdopterin-synthase adenylyltransferase MoeB Morganella morganii S2
4 group_1078 EHELCC_09160 46739 47557 -1 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA Morganella morganii S2
5 group_2294 EHELCC_18110 19780 20538 -1 thiF Molybdopterin or thiamine biosynthesis adenylyltransferase Morganella morganii S2
6 group_1174 NLDBIP_04210 168515 169288 1 moeB molybdopterin-synthase adenylyltransferase MoeB Morganella morganii S4
7 group_1078 NLDBIP_09540 46739 47557 -1 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA Morganella morganii S4
8 group_2294 NLDBIP_18040 18199 18957 1 thiF Molybdopterin or thiamine biosynthesis adenylyltransferase Morganella morganii S4
9 group_1078 LHKJJB_08215 169681 170499 1 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA Morganella morganii S3
10 group_1174 LHKJJB_10040 168629 169402 1 moeB molybdopterin-synthase adenylyltransferase MoeB Morganella morganii S3
11 group_2294 LHKJJB_18235 18199 18957 1 thiF Molybdopterin or thiamine biosynthesis adenylyltransferase Morganella morganii S3
12 group_1078 HKOGLL_07765 169681 170499 1 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA Morganella morganii S5
13 group_1174 HKOGLL_08935 21650 22423 -1 moeB molybdopterin-synthase adenylyltransferase MoeB Morganella morganii S5
14 group_2294 HKOGLL_17965 19780 20538 -1 thiF Molybdopterin or thiamine biosynthesis adenylyltransferase Morganella morganii S5
15 group_1174 F4V73_RS00910 193293 194066 -1 moeB molybdopterin-synthase adenylyltransferase MoeB Morganella psychrotolerans
16 group_2294 F4V73_RS15005 239039 239797 -1 HesA/MoeB/ThiF family protein Morganella psychrotolerans
17 group_1078 F4V73_RS15800 167405 168220 1 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA Morganella psychrotolerans
18 group_1174 PMI_RS03135 691702 692469 -1 moeB molybdopterin-synthase adenylyltransferase MoeB Proteus mirabilis HI4320
19 group_1078 PMI_RS11380 2504070 2504918 -1 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA Proteus mirabilis HI4320
20 group_2294 PMI_RS13725 3049296 3050045 1 HesA/MoeB/ThiF family protein Proteus mirabilis HI4320