Homologs in group_1078

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06115 FBDBKF_06115 90.8 Morganella morganii S1 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
EHELCC_09160 EHELCC_09160 90.8 Morganella morganii S2 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
NLDBIP_09540 NLDBIP_09540 90.8 Morganella morganii S4 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
LHKJJB_08215 LHKJJB_08215 90.8 Morganella morganii S3 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
HKOGLL_07765 HKOGLL_07765 90.8 Morganella morganii S5 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
PMI_RS11380 PMI_RS11380 78.1 Proteus mirabilis HI4320 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA

Distribution of the homologs in the orthogroup group_1078

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1078

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46927 6.76e-153 430 77 1 267 1 tcdA tRNA threonylcarbamoyladenosine dehydratase Escherichia coli (strain K12)
Q57097 9.24e-107 313 56 1 260 3 tcdA tRNA threonylcarbamoyladenosine dehydratase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O32037 1.22e-46 159 43 2 200 3 tcdA tRNA threonylcarbamoyladenosine dehydratase Bacillus subtilis (strain 168)
O13861 1.37e-24 105 31 3 207 3 SPAC1A6.10 tRNA threonylcarbamoyladenosine dehydratase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P38756 4.37e-22 97 27 5 201 1 TCD1 tRNA threonylcarbamoyladenosine dehydratase 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P36101 3.49e-21 95 34 4 191 1 TCD2 tRNA threonylcarbamoyladenosine dehydratase 2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P45211 2.57e-17 82 27 6 209 3 moeB Molybdopterin-synthase adenylyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P12282 6.22e-16 78 33 2 131 1 moeB Molybdopterin-synthase adenylyltransferase Escherichia coli (strain K12)
B4N7R4 1.59e-14 76 31 1 132 3 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila willistoni
B4NXF7 2.6e-14 75 32 1 132 3 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila yakuba
P30138 9.49e-14 72 33 3 143 1 thiF Sulfur carrier protein ThiS adenylyltransferase Escherichia coli (strain K12)
B4HYP0 1.6e-12 70 31 1 132 3 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila sechellia
Q9VLJ8 2.18e-12 70 31 1 132 1 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila melanogaster
B4GKQ3 7.3e-12 68 31 1 132 3 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila persimilis
Q29PG5 7.87e-12 68 31 1 132 3 GA12041 Adenylyltransferase and sulfurtransferase MOCS3-2 Drosophila pseudoobscura pseudoobscura
B5DS72 8.09e-12 68 31 1 132 3 GA24966 Adenylyltransferase and sulfurtransferase MOCS3-1 Drosophila pseudoobscura pseudoobscura
Q17CA7 1.02e-11 68 32 1 124 3 AAEL004607 Adenylyltransferase and sulfurtransferase MOCS3 Aedes aegypti
Q56067 1.02e-11 66 33 1 107 3 moeB Molybdopterin-synthase adenylyltransferase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B0W377 1.31e-11 67 30 1 124 3 CPIJ001621 Adenylyltransferase and sulfurtransferase MOCS3 Culex quinquefasciatus
B4KI53 2.23e-11 67 30 1 117 3 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila mojavensis
B4LRB9 2.45e-11 67 30 2 126 3 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila virilis
Q7PY41 5.66e-11 65 29 1 124 3 AGAP001737 Adenylyltransferase and sulfurtransferase MOCS3 Anopheles gambiae
B4JBC4 6.83e-11 65 33 1 117 3 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila grimshawi
P51335 9.65e-11 65 32 3 131 3 moeB Probable molybdopterin-synthase adenylyltransferase Porphyra purpurea
B3MLX7 1.12e-10 65 30 1 132 3 Uba4 Adenylyltransferase and sulfurtransferase MOCS3 Drosophila ananassae
B6TNK6 5.84e-10 62 27 5 208 2 MOCS3-1 Adenylyltransferase and sulfurtransferase MOCS3-1 Zea mays
B4FAT0 9.68e-10 62 27 5 208 2 MOCS3-2 Adenylyltransferase and sulfurtransferase MOCS3-2 Zea mays
Q9SJT1 1.1e-09 62 29 1 127 1 SAE2 SUMO-activating enzyme subunit 2 Arabidopsis thaliana
Q9Z1F9 1.18e-09 62 29 1 127 1 Uba2 SUMO-activating enzyme subunit 2 Mus musculus
Q7SXG4 1.55e-09 61 28 2 146 1 uba2 SUMO-activating enzyme subunit 2 Danio rerio
Q28GH3 2.56e-09 61 28 2 149 2 uba2 SUMO-activating enzyme subunit 2 Xenopus tropicalis
Q9UBT2 3.94e-09 60 29 1 127 1 UBA2 SUMO-activating enzyme subunit 2 Homo sapiens
P46049 4.4e-09 59 30 1 116 2 hesA1 Protein HesA, heterocyst Trichormus variabilis (strain ATCC 29413 / PCC 7937)
O42939 4.62e-09 60 26 3 141 1 uba2 Ubiquitin-activating enzyme E1-like Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q6B908 7.88e-09 59 31 1 107 3 moeB Probable molybdopterin-synthase adenylyltransferase Gracilaria tenuistipitata var. liui
A5DSR2 8.15e-09 59 34 2 115 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
Q642Q1 1.63e-08 58 27 1 131 2 uba2-a SUMO-activating enzyme subunit 2-A Xenopus laevis
Q7ZY60 1.78e-08 58 27 1 131 2 uba2-b SUMO-activating enzyme subunit 2-B Xenopus laevis
P46048 1.88e-08 57 30 1 137 2 hesA2 Protein HesA, vegetative Trichormus variabilis (strain ATCC 29413 / PCC 7937)
Q72J02 2.02e-08 57 32 1 86 1 ttuC Sulfur carrier protein adenylyltransferase Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)
P18500 2.09e-08 57 28 1 116 3 hesA Protein HesA Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
A7THV5 4.31e-08 57 32 3 131 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17)
Q54C02 4.71e-08 57 30 4 119 3 uba5 Ubiquitin-like modifier-activating enzyme 5 Dictyostelium discoideum
A3ACF3 8.59e-08 56 23 4 205 3 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3 Oryza sativa subsp. japonica
Q9ZNW0 8.95e-08 56 31 2 132 2 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3 Arabidopsis thaliana
P41226 1.07e-07 56 26 4 157 1 UBA7 Ubiquitin-like modifier-activating enzyme 7 Homo sapiens
Q0CFD4 2.35e-07 55 30 3 123 3 uba4 Adenylyltransferase and sulfurtransferase uba4 Aspergillus terreus (strain NIH 2624 / FGSC A1156)
Q5R4A0 2.78e-07 54 35 1 98 2 UBA3 NEDD8-activating enzyme E1 catalytic subunit Pongo abelii
Q8TBC4 2.88e-07 54 35 1 98 1 UBA3 NEDD8-activating enzyme E1 catalytic subunit Homo sapiens
Q55FS0 3.21e-07 54 29 2 131 3 mocs3 Adenylyltransferase and sulfurtransferase MOCS3 Dictyostelium discoideum
P46037 3.39e-07 53 30 1 116 3 hesA Protein HesA Leptolyngbya boryana
Q99MI7 4.58e-07 53 34 1 98 1 Uba3 NEDD8-activating enzyme E1 catalytic subunit Rattus norvegicus
Q8C878 4.63e-07 53 34 1 98 1 Uba3 NEDD8-activating enzyme E1 catalytic subunit Mus musculus
A6ZT19 4.76e-07 53 31 1 97 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Saccharomyces cerevisiae (strain YJM789)
P38820 4.85e-07 53 31 1 97 1 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
B5VK45 4.85e-07 53 31 1 97 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Saccharomyces cerevisiae (strain AWRI1631)
B3LSM6 4.85e-07 53 31 1 97 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Saccharomyces cerevisiae (strain RM11-1a)
A4RPM5 5.98e-07 53 27 1 117 3 UBA4 Adenylyltransferase and sulfurtransferase uba4 Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
Q7ZVX6 1.27e-06 52 33 1 98 2 uba3 NEDD8-activating enzyme E1 catalytic subunit Danio rerio
P52488 1.29e-06 52 22 0 147 1 UBA2 Ubiquitin-activating enzyme E1-like Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P20973 1.6e-06 52 24 5 176 1 UBA1 Ubiquitin-activating enzyme E1 1 Triticum aestivum
Q6BHZ2 2.05e-06 52 29 2 116 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968)
O31702 2.07e-06 51 34 7 144 3 moeB Molybdopterin-synthase adenylyltransferase Bacillus subtilis (strain 168)
Q06624 2.45e-06 51 25 1 139 1 AOS1 DNA damage tolerance protein RHC31 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O44510 2.72e-06 51 24 1 117 3 moc-3 Adenylyltransferase and sulfurtransferase MOCS3 Caenorhabditis elegans
Q54L40 2.97e-06 51 25 1 151 3 uba2 SUMO-activating enzyme subunit 2 Dictyostelium discoideum
Q6AXQ0 3.01e-06 51 26 1 134 2 Sae1 SUMO-activating enzyme subunit 1 Rattus norvegicus
Q6CBK1 3.06e-06 51 37 5 121 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Yarrowia lipolytica (strain CLIB 122 / E 150)
A2R3H4 3.2e-06 51 28 3 123 3 uba4 Adenylyltransferase and sulfurtransferase uba4 Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
Q8AWD2 3.27e-06 51 31 3 119 2 mocs3 Adenylyltransferase and sulfurtransferase MOCS3 Danio rerio
P9WMN7 3.33e-06 51 29 2 112 1 moeZ Probable adenylyltransferase/sulfurtransferase MoeZ Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMN6 3.33e-06 51 29 2 112 3 moeZ Probable adenylyltransferase/sulfurtransferase MoeZ Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q756K6 4.7e-06 50 29 1 97 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
O59954 5.87e-06 50 26 1 112 1 uba4 Adenylyltransferase and sulfurtransferase uba4 Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
A1CAZ7 6.2e-06 50 28 4 137 3 uba4 Adenylyltransferase and sulfurtransferase uba4 Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107)
O23034 7.49e-06 50 41 1 65 3 At1g05350 Ubiquitin-like modifier-activating enzyme 5 Arabidopsis thaliana
Q9V6U8 7.95e-06 50 33 1 98 1 Uba3 Nedd8-activating enzyme E1 catalytic subunit Drosophila melanogaster
P31251 8.09e-06 50 23 5 176 2 UBA2 Ubiquitin-activating enzyme E1 2 Triticum aestivum
Q6K6K7 8.79e-06 50 39 1 69 2 Os02g0506500 Ubiquitin-like modifier-activating enzyme 5 Oryza sativa subsp. japonica
Q9DBK7 1.04e-05 50 24 2 153 1 Uba7 Ubiquitin-like modifier-activating enzyme 7 Mus musculus
O31619 1.04e-05 49 27 4 140 3 thiF Sulfur carrier protein ThiS adenylyltransferase Bacillus subtilis (strain 168)
O65041 2.35e-05 48 41 0 60 1 ECR1 NEDD8-activating enzyme E1 catalytic subunit Arabidopsis thaliana
Q9R1T2 2.39e-05 48 26 1 134 1 Sae1 SUMO-activating enzyme subunit 1 Mus musculus
P52495 3.08e-05 48 26 0 87 3 UBA1 Ubiquitin-activating enzyme E1 1 Candida albicans (strain WO-1)
A3LQF9 3.18e-05 48 30 2 116 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
P22515 5.24e-05 48 25 6 162 1 UBA1 Ubiquitin-activating enzyme E1 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P22515 0.000179 46 21 2 136 1 UBA1 Ubiquitin-activating enzyme E1 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q4WV19 5.35e-05 47 29 3 130 3 uba4 Adenylyltransferase and sulfurtransferase uba4 Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
A5DMB6 5.76e-05 47 27 1 120 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
B0Y0P7 5.8e-05 47 29 3 130 3 uba4 Adenylyltransferase and sulfurtransferase uba4 Aspergillus fumigatus (strain CBS 144.89 / FGSC A1163 / CEA10)
Q09765 5.84e-05 47 28 4 140 1 uba3 NEDD8-activating enzyme E1 catalytic subunit Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9NAN1 6.17e-05 47 24 1 132 3 uba-2 SUMO-activating enzyme subunit uba-2 Caenorhabditis elegans
Q09810 6.58e-05 47 28 2 133 3 uba4 Adenylyltransferase and sulfurtransferase uba4 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P31252 7.4e-05 47 23 2 156 1 UBA3 Ubiquitin-activating enzyme E1 3 Triticum aestivum
A2VE14 7.66e-05 47 25 1 134 2 SAE1 SUMO-activating enzyme subunit 1 Bos taurus
Q19360 8.56e-05 47 32 2 86 1 rfl-1 NEDD8-activating enzyme E1 catalytic subunit Caenorhabditis elegans
Q54JM3 8.65e-05 47 21 2 147 3 nae1 NEDD8-activating enzyme E1 regulatory subunit Dictyostelium discoideum
A8WRE3 8.88e-05 47 26 3 119 3 uba-4 Adenylyltransferase and sulfurtransferase MOCS3 Caenorhabditis briggsae
Q5NVN7 0.000116 46 25 1 134 2 SAE1 SUMO-activating enzyme subunit 1 Pongo abelii
Q9UBE0 0.000116 46 25 1 134 1 SAE1 SUMO-activating enzyme subunit 1 Homo sapiens
Q99344 0.000123 46 28 4 104 1 UBA3 NEDD8-activating enzyme E1 catalytic subunit Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q6CMC2 0.000156 46 28 1 97 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Q59WH7 0.000181 46 31 1 103 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Candida albicans (strain SC5314 / ATCC MYA-2876)
Q1XDF1 0.000234 45 25 8 259 3 moeB Probable molybdopterin-synthase adenylyltransferase Neopyropia yezoensis
Q8JGT5 0.00025 45 28 1 101 2 sae1 SUMO-activating enzyme subunit 1 Xenopus laevis
Q28DS0 0.000302 45 28 1 101 2 sae1 SUMO-activating enzyme subunit 1 Xenopus tropicalis
Q2TWN3 0.000322 45 34 0 64 3 uba4 Adenylyltransferase and sulfurtransferase uba4 Aspergillus oryzae (strain ATCC 42149 / RIB 40)
D4GSF3 0.000371 44 33 1 110 1 ubaA SAMP-activating enzyme E1 Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
B4M357 0.000397 45 29 4 123 3 GJ19153 Ubiquitin-like modifier-activating enzyme 5 Drosophila virilis
Q55C16 0.000582 44 23 4 176 3 uba1 Ubiquitin-like modifier-activating enzyme 1 Dictyostelium discoideum
D1GY43 0.000666 44 29 4 125 3 GF23479 Ubiquitin-like modifier-activating enzyme 5 Drosophila ananassae
Q6FR35 0.000683 44 26 2 117 3 UBA4 Adenylyltransferase and sulfurtransferase UBA4 Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15800
Feature type CDS
Gene tcdA
Product tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
Location 167405 - 168220 (strand: 1)
Length 816 (nucleotides) / 271 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1078
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00899 ThiF family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1179 Translation, ribosomal structure and biogenesis (J) J tRNA A37 threonylcarbamoyladenosine dehydratase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22132 tRNA threonylcarbamoyladenosine dehydratase - -

Protein Sequence

MQNLLSDAYLQRFAGIGRLYGQQALHLFARSHFCVIGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNINRQIHAMQGTIGQPKIEVMRERILAINPECQVHCVDDFVTVDNVPEMMQPGFDYVIDAIDSIRPKAALLAYCRRNKIPLVTTGGAGGQIDPTQIQVADLAKTLQDPLAAKLRERLKSEHGVLKNSKGRLGIECVFSTEALRYPQADGSAVCGMKNTAEGSMRMDCAAGFGAATVVTASFGFVAVSHALKKLMAKAARAAAE

Flanking regions ( +/- flanking 50bp)

GGATCATTTCTCCGTTGTTTCCGTGACTTTTTCACCTCAGGTTCCCGATTATGCAAAACCTTTTATCTGATGCTTACCTGCAACGCTTTGCGGGTATTGGCCGCCTTTATGGTCAGCAGGCGCTTCATTTATTTGCCCGTTCTCATTTCTGTGTCATCGGCATCGGCGGTGTCGGCTCCTGGGCGGCAGAAGCACTGGCACGTACCGGGATCGGGGCGATTACATTGATTGATATGGATGATGTTTGCGTGACAAATATTAACCGGCAGATCCACGCGATGCAGGGAACAATCGGACAGCCTAAGATTGAGGTGATGCGTGAGCGGATACTTGCGATCAATCCTGAATGTCAGGTGCATTGTGTGGATGATTTTGTGACGGTGGATAATGTACCGGAAATGATGCAGCCAGGGTTTGATTACGTGATTGATGCGATTGACAGCATTCGCCCGAAAGCCGCGCTGCTGGCGTATTGCCGCCGCAATAAAATTCCGTTGGTCACAACCGGCGGGGCGGGCGGACAGATTGATCCGACACAGATTCAGGTCGCTGATTTGGCGAAAACACTTCAGGATCCGCTGGCTGCAAAACTGCGTGAGCGCCTGAAATCAGAGCATGGCGTGCTTAAAAACAGCAAAGGACGGTTGGGAATTGAGTGTGTTTTCTCAACAGAAGCATTACGTTACCCGCAGGCAGACGGCAGTGCAGTCTGTGGCATGAAAAATACCGCAGAAGGCAGTATGCGGATGGATTGTGCAGCGGGTTTTGGTGCCGCCACCGTTGTGACGGCCTCATTCGGGTTTGTTGCGGTATCTCACGCCCTGAAAAAACTGATGGCAAAAGCCGCGCGTGCGGCGGCTGAATAACGTGCCGGTCAGTCGCTGAATTTTTGTGCGATAATACGTGCGGCATCAAT