PF00857


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00857, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 26 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00857
Description Isochorismatase family

Occurence in the database

PF00857 is associated with 26 different proteins (see tab "Protein list" and "Profile")
The 26 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3190 FBDBKF_01565 3129 3773 1 pncA Nicotinamidase-related amidase Morganella morganii S1
1 group_981 FBDBKF_05420 93942 94580 1 pncA bifunctional nicotinamidase/pyrazinamidase Morganella morganii S1
2 group_1242 FBDBKF_07225 121923 122600 -1 pncA Nicotinamidase-related amidase Morganella morganii S1
3 group_2239 FBDBKF_17145 14338 14910 1 pncA Nicotinamidase-related amidase Morganella morganii S1
4 group_2239 EHELCC_01745 340591 341163 -1 pncA Nicotinamidase-related amidase Morganella morganii S2
5 group_3190 EHELCC_02035 390949 391593 1 pncA Nicotinamidase-related amidase Morganella morganii S2
6 group_1242 EHELCC_03745 63586 64263 1 pncA Nicotinamidase-related amidase Morganella morganii S2
7 group_981 EHELCC_12170 86914 87552 -1 pncA bifunctional nicotinamidase/pyrazinamidase Morganella morganii S2
8 group_3190 NLDBIP_01425 288543 289187 -1 pncA Nicotinamidase-related amidase Morganella morganii S4
9 group_2239 NLDBIP_01715 338973 339545 1 pncA Nicotinamidase-related amidase Morganella morganii S4
10 group_1242 NLDBIP_03745 63382 64059 1 pncA Nicotinamidase-related amidase Morganella morganii S4
11 group_981 NLDBIP_12510 86869 87507 -1 pncA bifunctional nicotinamidase/pyrazinamidase Morganella morganii S4
12 group_2239 LHKJJB_00320 53140 53712 -1 pncA Nicotinamidase-related amidase Morganella morganii S3
13 group_3190 LHKJJB_00610 103498 104142 1 pncA Nicotinamidase-related amidase Morganella morganii S3
14 group_1242 LHKJJB_09575 63496 64173 1 pncA Nicotinamidase-related amidase Morganella morganii S3
15 group_981 LHKJJB_12370 86914 87552 -1 pncA bifunctional nicotinamidase/pyrazinamidase Morganella morganii S3
16 group_2239 HKOGLL_00360 58651 59223 -1 pncA Nicotinamidase-related amidase Morganella morganii S5
17 group_3190 HKOGLL_00650 109009 109653 1 pncA Nicotinamidase-related amidase Morganella morganii S5
18 group_1242 HKOGLL_09400 126879 127556 -1 pncA Nicotinamidase-related amidase Morganella morganii S5
19 group_981 HKOGLL_10985 86914 87552 -1 pncA bifunctional nicotinamidase/pyrazinamidase Morganella morganii S5
20 group_1242 F4V73_RS01410 310043 310720 -1 hydrolase Morganella psychrotolerans
21 group_981 F4V73_RS03875 820233 820871 -1 pncA bifunctional nicotinamidase/pyrazinamidase Morganella psychrotolerans
22 group_2239 F4V73_RS08900 1847309 1847848 1 cysteine hydrolase family protein Morganella psychrotolerans
23 group_2239 PMI_RS02000 471566 472168 1 isochorismatase family cysteine hydrolase Proteus mirabilis HI4320
24 group_981 PMI_RS07275 1594029 1594670 1 pncA bifunctional nicotinamidase/pyrazinamidase Proteus mirabilis HI4320
25 group_1242 PMI_RS10855 2392192 2392869 -1 hydrolase Proteus mirabilis HI4320