Orthogroup:group_2275


Homologs in group_2275

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17490 FBDBKF_17490 Morganella morganii S1 hypD hydrogenase formation protein HypD
EHELCC_17385 EHELCC_17385 Morganella morganii S2 hypD hydrogenase formation protein HypD
NLDBIP_17810 NLDBIP_17810 Morganella morganii S4 hypD hydrogenase formation protein HypD
LHKJJB_17730 LHKJJB_17730 Morganella morganii S3 hypD hydrogenase formation protein HypD
HKOGLL_17740 HKOGLL_17740 Morganella morganii S5 hypD hydrogenase formation protein HypD
F4V73_RS16665 F4V73_RS16665 Morganella psychrotolerans hypD hydrogenase formation protein HypD
PMI_RS00190 PMI_RS00190 Proteus mirabilis HI4320 hypD hydrogenase formation protein HypD

Distribution of group_2275 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2275 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2275

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2275.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hypD 7

Product

# Product Occurence
1 hydrogenase formation protein HypD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0409 7 O Posttranslational modification, protein turnover, chaperones (O) Hydrogenase maturation factor HypD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04654 7 hydrogenase expression/formation protein HypD - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01924 7 Hydrogenase formation hypA family

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
Hydrogenase expression/formation protein HupD 1
Hydrogenase maturation factor HypD 5
Hydrogenase maturation factor HypD1 1
Hydrogenase maturation factor HypD2 1
Putative hydrogenase expression/formation protein MJ0993 1

Protein length

Min length 376
Max length 378
Mean length (sd) 376.3 (0.8)
Median length 376.0

Protein length distribution