PF00574


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00574, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00574
Description Clp protease

Occurence in the database

PF00574 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_364 FBDBKF_13105 12722 14752 -1 ClpP-like prohead protease/major capsid protein fusion protein Morganella morganii S1
1 group_2111 FBDBKF_15870 24660 25280 1 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP Morganella morganii S1
2 group_3582 FBDBKF_19405 11604 12455 -1 ATP-dependent Clp protease proteolytic subunit Morganella morganii S1
3 group_2111 EHELCC_18470 12099 12719 1 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP Morganella morganii S2
4 group_3582 EHELCC_19255 948 1799 1 ATP-dependent Clp protease proteolytic subunit Morganella morganii S2
5 group_364 EHELCC_19450 157 2187 -1 ClpP-like prohead protease/major capsid protein fusion protein Morganella morganii S2
6 group_2111 NLDBIP_17305 12099 12719 1 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP Morganella morganii S4
7 group_3582 NLDBIP_19385 948 1799 1 ATP-dependent Clp protease proteolytic subunit Morganella morganii S4
8 group_364 NLDBIP_19805 136 2172 1 ClpP-like prohead protease/major capsid protein fusion protein Morganella morganii S4
9 group_364 NLDBIP_19880 285 2315 -1 ClpP-like prohead protease/major capsid protein fusion protein Morganella morganii S4
10 group_2111 LHKJJB_17355 43469 44089 -1 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP Morganella morganii S3
11 group_3582 LHKJJB_19420 11604 12455 -1 ATP-dependent Clp protease proteolytic subunit Morganella morganii S3
12 group_364 LHKJJB_19780 811 2847 -1 ClpP-like prohead protease/major capsid protein fusion protein Morganella morganii S3
13 group_364 LHKJJB_19845 136 2166 1 ClpP-like prohead protease/major capsid protein fusion protein Morganella morganii S3
14 group_364 HKOGLL_05965 245030 247060 1 ClpP-like prohead protease/major capsid protein fusion protein Morganella morganii S5
15 group_2111 HKOGLL_17040 12099 12719 1 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP Morganella morganii S5
16 group_3582 HKOGLL_19190 948 1799 1 ATP-dependent Clp protease proteolytic subunit Morganella morganii S5
17 group_364 F4V73_RS02100 450117 452099 1 Clp protease ClpP Morganella psychrotolerans
18 group_2111 F4V73_RS16440 106354 106974 -1 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP Morganella psychrotolerans
19 group_2111 PMI_RS00555 143003 143626 1 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP Proteus mirabilis HI4320