Orthogroup:group_2149


Homologs in group_2149

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16145 FBDBKF_16145 Morganella morganii S1 selB selenocysteine-specific translation elongation factor
EHELCC_16180 EHELCC_16180 Morganella morganii S2 selB selenocysteine-specific translation elongation factor
NLDBIP_17160 NLDBIP_17160 Morganella morganii S4 selB selenocysteine-specific translation elongation factor
LHKJJB_17080 LHKJJB_17080 Morganella morganii S3 selB selenocysteine-specific translation elongation factor
HKOGLL_16760 HKOGLL_16760 Morganella morganii S5 selB selenocysteine-specific translation elongation factor
F4V73_RS17470 F4V73_RS17470 Morganella psychrotolerans selB selenocysteine-specific translation elongation factor
PMI_RS15370 PMI_RS15370 Proteus mirabilis HI4320 selB selenocysteine-specific translation elongation factor

Distribution of group_2149 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2149 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2149

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2149.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 selB 7

Product

# Product Occurence
1 selenocysteine-specific translation elongation factor 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3276 7 J Translation, ribosomal structure and biogenesis (J) Selenocysteine-specific translation elongation factor SelB

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03833 7 selenocysteine-specific elongation factor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00009 7 Elongation factor Tu GTP binding domain
PF03144 6 Elongation factor Tu domain 2
PF09106 7 Elongation factor SelB, winged helix
PF09107 7 Elongation factor SelB, winged helix
PF21214 7 Selenocysteine-specific elongation factor, winged helix domain
PF21458 7 Selenocysteine-specific elongation factor, winged helix 1/3

Annotations of the 646 SwissProt hits

Annotation Number of occurrences
Elongation factor 1-alpha 17
Elongation factor Tu 482
Elongation factor Tu (Fragment) 2
Elongation factor Tu 1 44
Elongation factor Tu 2 44
Elongation factor Tu, apicoplast 4
Elongation factor Tu, chloroplastic 18
Elongation factor Tu, cyanelle 1
Elongation factor Tu, mitochondrial 9
Elongation factor Tu, plastid 3
Elongation factor Tu-1 3
Elongation factor Tu-2 1
Elongation factor Tu-3 2
Elongation factor Tu-A 6
Elongation factor Tu-B 5
Selenocysteine-specific elongation factor 5

Protein length

Unique protein length 620

Protein length distribution