Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K21064
Protein list: lists the 21 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
KO part of 4 pathways
Riboflavin metabolism |
Metabolic pathways |
Biosynthesis of secondary metabolites |
Biosynthesis of cofactors |
KO part of 1 modules
M00125 | Cofactor and vitamin metabolism | Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD |
Occurence in the database
K21064 is associated with 21 different proteins |
The 21 proteins are classified into 3 different orthogroup(s) |
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_1540 | FBDBKF_09635 | 26353 | 27174 | 1 | cof | pyridoxal phosphatase | Morganella morganii S1 |
1 | group_1540 | EHELCC_04435 | 218318 | 219139 | 1 | cof | pyridoxal phosphatase | Morganella morganii S2 |
2 | group_1540 | NLDBIP_04435 | 218114 | 218935 | 1 | cof | pyridoxal phosphatase | Morganella morganii S4 |
3 | group_1540 | LHKJJB_14195 | 116443 | 117264 | -1 | cof | pyridoxal phosphatase | Morganella morganii S3 |
4 | group_1540 | HKOGLL_12340 | 27134 | 27955 | 1 | cof | pyridoxal phosphatase | Morganella morganii S5 |
5 | group_2215 | FBDBKF_16405 | 5913 | 6719 | -1 | yidA | sugar-phosphatase | Morganella morganii S1 |
6 | group_2215 | EHELCC_08270 | 122899 | 123705 | -1 | yidA | sugar-phosphatase | Morganella morganii S2 |
7 | group_2215 | NLDBIP_08595 | 122899 | 123705 | -1 | yidA | sugar-phosphatase | Morganella morganii S4 |
8 | group_2215 | LHKJJB_05670 | 133454 | 134260 | 1 | yidA | sugar-phosphatase | Morganella morganii S3 |
9 | group_2215 | HKOGLL_05245 | 107490 | 108296 | -1 | yidA | sugar-phosphatase | Morganella morganii S5 |
10 | group_1411 | FBDBKF_08395 | 55438 | 56241 | 1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S1 |
11 | group_1411 | EHELCC_13130 | 107484 | 108287 | -1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S2 |
12 | group_1411 | NLDBIP_13470 | 107484 | 108287 | -1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S4 |
13 | group_1411 | LHKJJB_13085 | 54156 | 54959 | 1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S3 |
14 | group_1411 | HKOGLL_11945 | 107484 | 108287 | -1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S5 |
15 | group_1540 | F4V73_RS00705 | 146402 | 147223 | -1 | pyridoxal phosphatase | Morganella psychrotolerans | |
16 | group_2215 | F4V73_RS02925 | 621094 | 621900 | -1 | yidA | sugar-phosphatase | Morganella psychrotolerans |
17 | group_1411 | F4V73_RS09595 | 20182 | 20988 | 1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella psychrotolerans |
18 | group_1540 | PMI_RS02955 | 651677 | 652498 | -1 | pyridoxal phosphatase | Proteus mirabilis HI4320 | |
19 | group_2215 | PMI_RS07800 | 1707504 | 1708310 | 1 | yidA | sugar-phosphatase | Proteus mirabilis HI4320 |
20 | group_1411 | PMI_RS16650 | 3670106 | 3670906 | 1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Proteus mirabilis HI4320 |