K12573


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K12573
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K12573
KO K12573
Description ribonuclease R [EC:3.1.13.1]

KO part of 1 pathways

RNA degradation

KO part of 0 modules

Occurence in the database

K12573 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1427 FBDBKF_08485 77735 80173 1 rnr ribonuclease R Morganella morganii S1
1 group_1427 EHELCC_13040 83552 85990 -1 rnr ribonuclease R Morganella morganii S2
2 group_1427 NLDBIP_13380 83552 85990 -1 rnr ribonuclease R Morganella morganii S4
3 group_1427 LHKJJB_13175 76453 78891 1 rnr ribonuclease R Morganella morganii S3
4 group_1427 HKOGLL_11855 83552 85990 -1 rnr ribonuclease R Morganella morganii S5
5 group_1427 F4V73_RS09705 43924 46365 1 rnr ribonuclease R Morganella psychrotolerans
6 group_1427 PMI_RS16780 3699300 3701789 1 rnr ribonuclease R Proteus mirabilis HI4320