K11927


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K11927, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K11927
KO K11927
Description ATP-dependent RNA helicase RhlE [EC:3.6.4.13]

KO part of 1 pathways

RNA degradation

KO part of 0 modules

Occurence in the database

K11927 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1477 PMI_RS03055 673134 674531 1 rhlE ATP-dependent RNA helicase RhlE Proteus mirabilis HI4320
1 group_1477 FBDBKF_09535 4801 6147 -1 rhlE ATP-dependent RNA helicase RhlE Morganella morganii S1
2 group_1477 EHELCC_04335 196766 198112 -1 rhlE ATP-dependent RNA helicase RhlE Morganella morganii S2
3 group_1477 NLDBIP_04335 196562 197908 -1 rhlE ATP-dependent RNA helicase RhlE Morganella morganii S4
4 group_1477 LHKJJB_14295 137470 138816 1 rhlE ATP-dependent RNA helicase RhlE Morganella morganii S3
5 group_1477 HKOGLL_12240 5582 6928 -1 rhlE ATP-dependent RNA helicase RhlE Morganella morganii S5
6 group_1477 F4V73_RS00830 171998 173353 1 rhlE ATP-dependent RNA helicase RhlE Morganella psychrotolerans