K10001


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K10001, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K10001
KO K10001
Description glutamate/aspartate transport system substrate-binding protein

KO part of 2 pathways

ABC transporters
Two-component system

KO part of 0 modules

Occurence in the database

K10001 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1546 PMI_RS02155 504757 505650 -1 amino acid ABC transporter substrate-binding protein Proteus mirabilis HI4320
1 group_1546 FBDBKF_10015 96430 97326 1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain Morganella morganii S1
2 group_1546 EHELCC_04815 288395 289291 1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain Morganella morganii S2
3 group_1546 NLDBIP_04815 288191 289087 1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain Morganella morganii S4
4 group_1546 LHKJJB_13815 46291 47187 -1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain Morganella morganii S3
5 group_1546 HKOGLL_12720 97211 98107 1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain Morganella morganii S5
6 group_1546 F4V73_RS00320 74430 75332 -1 glutamate/aspartate ABC transporter substrate-binding protein Morganella psychrotolerans