Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K02919
Protein list: lists the 14 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
Occurence in the database
K02919 is associated with 14 different proteins |
The 14 proteins are classified into 2 different orthogroup(s) |
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_977 | FBDBKF_04830 | 172535 | 172660 | -1 | ykgO | type B 50S ribosomal protein L36 | Morganella morganii S1 |
1 | group_977 | EHELCC_06120 | 231992 | 232117 | -1 | ykgO | type B 50S ribosomal protein L36 | Morganella morganii S2 |
2 | group_977 | NLDBIP_06440 | 273057 | 273182 | -1 | ykgO | type B 50S ribosomal protein L36 | Morganella morganii S4 |
3 | group_977 | LHKJJB_03320 | 250581 | 250706 | -1 | ykgO | type B 50S ribosomal protein L36 | Morganella morganii S3 |
4 | group_977 | HKOGLL_06795 | 172445 | 172570 | -1 | ykgO | type B 50S ribosomal protein L36 | Morganella morganii S5 |
5 | group_977 | F4V73_RS09285 | 1948189 | 1948314 | -1 | ykgO | type B 50S ribosomal protein L36 | Morganella psychrotolerans |
6 | group_2411 | FBDBKF_19140 | 12756 | 12872 | -1 | rpmJ | 50S ribosomal protein L36 | Morganella morganii S1 |
7 | group_2411 | EHELCC_18885 | 12756 | 12872 | -1 | rpmJ | 50S ribosomal protein L36 | Morganella morganii S2 |
8 | group_2411 | NLDBIP_18900 | 12756 | 12872 | -1 | rpmJ | 50S ribosomal protein L36 | Morganella morganii S4 |
9 | group_2411 | LHKJJB_18755 | 12756 | 12872 | -1 | rpmJ | 50S ribosomal protein L36 | Morganella morganii S3 |
10 | group_2411 | HKOGLL_18490 | 12756 | 12872 | -1 | rpmJ | 50S ribosomal protein L36 | Morganella morganii S5 |
11 | group_2411 | F4V73_RS19025 | 17465 | 17581 | 1 | rpmJ | 50S ribosomal protein L36 | Morganella psychrotolerans |
12 | group_2411 | PMI_RS19140 | 3592946 | 3593062 | 1 | rpmJ | 50S ribosomal protein L36 | Proteus mirabilis HI4320 |
13 | group_977 | PMI_RS16820 | 3705631 | 3705756 | 1 | ykgO | type B 50S ribosomal protein L36 | Proteus mirabilis HI4320 |