Orthogroup:group_2411


Homologs in group_2411

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19410 FBDBKF_19410 Morganella morganii S1 - phage portal protein
EHELCC_19250 EHELCC_19250 Morganella morganii S2 - Phage portal protein, HK97 family
NLDBIP_19380 NLDBIP_19380 Morganella morganii S4 - Phage portal protein, HK97 family
LHKJJB_19425 LHKJJB_19425 Morganella morganii S3 - Phage portal protein, HK97 family
HKOGLL_19185 HKOGLL_19185 Morganella morganii S5 - Phage portal protein, HK97 family
PMI_RS04535 PMI_RS04535 Proteus mirabilis HI4320 - phage portal protein
PMI_RS09830 PMI_RS09830 Proteus mirabilis HI4320 - phage portal protein

Distribution of group_2411 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2411 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2411

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2411.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 phage portal protein 3
2 Phage portal protein, HK97 family 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4695 6 X Mobilome: prophages, transposons (X) Phage portal protein BeeE
COG5518 1 X Mobilome: prophages, transposons (X) Phage capsid portal protein XkdE

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04860 7 Phage portal protein

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Portal protein 1
Probable portal protein 3
Protein BeeE 1
Protein ORF5 in retron Ec67 1
Uncharacterized protein RBE_0759 1
Uncharacterized protein RF_0471 1

Protein length

Min length 266
Max length 445
Mean length (sd) 324.7 (79.6)
Median length 266.0

Protein length distribution