Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K02529
Protein list: lists the 18 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
KO part of 0 pathways
KO part of 0 modules
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_118 | FBDBKF_11080 | 39340 | 40344 | 1 | purR | DNA-binding transcriptional regulator, LacI/PurR family | Morganella morganii S1 |
1 | group_118 | EHELCC_05145 | 19124 | 20128 | -1 | purR | DNA-binding transcriptional regulator, LacI/PurR family | Morganella morganii S2 |
2 | group_118 | NLDBIP_05465 | 60189 | 61193 | -1 | purR | DNA-binding transcriptional regulator, LacI/PurR family | Morganella morganii S4 |
3 | group_118 | LHKJJB_02345 | 37713 | 38717 | -1 | purR | DNA-binding transcriptional regulator, LacI/PurR family | Morganella morganii S3 |
4 | group_118 | HKOGLL_15725 | 61153 | 62157 | -1 | purR | DNA-binding transcriptional regulator, LacI/PurR family | Morganella morganii S5 |
5 | group_118 | FBDBKF_04495 | 93442 | 94455 | 1 | galS | HTH-type transcriptional regulator GalS | Morganella morganii S1 |
6 | group_118 | EHELCC_05785 | 152899 | 153912 | 1 | galS | HTH-type transcriptional regulator GalS | Morganella morganii S2 |
7 | group_118 | NLDBIP_06105 | 193964 | 194977 | 1 | galS | HTH-type transcriptional regulator GalS | Morganella morganii S4 |
8 | group_118 | LHKJJB_02985 | 171488 | 172501 | 1 | galS | HTH-type transcriptional regulator GalS | Morganella morganii S3 |
9 | group_118 | HKOGLL_06460 | 93352 | 94365 | 1 | galS | HTH-type transcriptional regulator GalS | Morganella morganii S5 |
10 | group_437 | FBDBKF_15390 | 3230 | 4222 | -1 | rbsR | ribose operon transcriptional repressor RbsR | Morganella morganii S1 |
11 | group_437 | EHELCC_15750 | 2530 | 3522 | -1 | rbsR | ribose operon transcriptional repressor RbsR | Morganella morganii S2 |
12 | group_437 | NLDBIP_16620 | 77141 | 78133 | 1 | rbsR | ribose operon transcriptional repressor RbsR | Morganella morganii S4 |
13 | group_437 | LHKJJB_16185 | 2530 | 3522 | -1 | rbsR | ribose operon transcriptional repressor RbsR | Morganella morganii S3 |
14 | group_437 | HKOGLL_15955 | 2530 | 3522 | -1 | rbsR | ribose operon transcriptional repressor RbsR | Morganella morganii S5 |
15 | group_437 | F4V73_RS17755 | 192879 | 193871 | 1 | rbsR | ribose operon transcriptional repressor RbsR | Morganella psychrotolerans |
16 | group_437 | PMI_RS00420 | 114382 | 115380 | -1 | rbsR | ribose operon transcriptional repressor RbsR | Proteus mirabilis HI4320 |
17 | group_118 | PMI_RS09595 | 2095863 | 2096873 | -1 | substrate-binding domain-containing protein | Proteus mirabilis HI4320 |