Orthogroup:group_437


Homologs in group_437

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15390 FBDBKF_15390 Morganella morganii S1 rbsR ribose operon transcriptional repressor RbsR
EHELCC_15750 EHELCC_15750 Morganella morganii S2 rbsR ribose operon transcriptional repressor RbsR
NLDBIP_16620 NLDBIP_16620 Morganella morganii S4 rbsR ribose operon transcriptional repressor RbsR
LHKJJB_16185 LHKJJB_16185 Morganella morganii S3 rbsR ribose operon transcriptional repressor RbsR
HKOGLL_15955 HKOGLL_15955 Morganella morganii S5 rbsR ribose operon transcriptional repressor RbsR
F4V73_RS17755 F4V73_RS17755 Morganella psychrotolerans rbsR ribose operon transcriptional repressor RbsR
PMI_RS00420 PMI_RS00420 Proteus mirabilis HI4320 rbsR ribose operon transcriptional repressor RbsR

Distribution of group_437 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_437 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_437

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_437.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rbsR 7

Product

# Product Occurence
1 ribose operon transcriptional repressor RbsR 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1609 7 K Transcription (K) DNA-binding transcriptional regulator, LacI/PurR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02529 7 LacI family transcriptional regulator, galactose operon repressor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00356 7 Bacterial regulatory proteins, lacI family
PF13377 7 Periplasmic binding protein-like domain

Annotations of the 197 SwissProt hits

Annotation Number of occurrences
Arabinose metabolism transcriptional repressor 3
Catabolite control protein A 12
Catabolite control protein B 1
Catabolite repressor/activator 6
D-allose-binding periplasmic protein 1
D-apiose import binding protein 3
D-ribose/D-allose-binding protein 1
Fructose operon regulatory protein 1
HTH-type transcriptional regulator AglR 1
HTH-type transcriptional regulator AscG 1
HTH-type transcriptional regulator CelR 1
HTH-type transcriptional regulator Cphy_2742 1
HTH-type transcriptional regulator DegA 1
HTH-type transcriptional regulator EbgR 1
HTH-type transcriptional regulator GalR 6
HTH-type transcriptional regulator GalS 2
HTH-type transcriptional regulator GanR 1
HTH-type transcriptional regulator GntR 3
HTH-type transcriptional regulator IdnR 1
HTH-type transcriptional regulator IpsA 1
HTH-type transcriptional regulator KdgR 1
HTH-type transcriptional regulator LacR 1
HTH-type transcriptional regulator MalR 5
HTH-type transcriptional regulator PtxS 3
HTH-type transcriptional regulator RafR 1
HTH-type transcriptional regulator RegA 2
HTH-type transcriptional regulator TreR 2
HTH-type transcriptional regulator pepR1 1
HTH-type transcriptional regulator reg1 1
HTH-type transcriptional repressor CytR 4
HTH-type transcriptional repressor MelR 1
HTH-type transcriptional repressor PurR 88
Lactose operon repressor 1
Lactose operon repressor (Fragment) 2
Maltose regulon regulatory protein MalI 1
Maltose regulon regulatory protein MalI (Fragment) 1
NTD biosynthesis operon regulator NtdR 1
Probable HTH-type transcriptional regulator EndR 1
Probable HTH-type transcriptional repressor ExuR 1
Probable opine utilization operon repressor (Fragment) 1
Ribitol operon repressor 1
Ribose import binding protein RbsB 5
Ribose operon repressor 9
Sucrose operon repressor 9
Uncharacterized HTH-type transcriptional regulator SCO4158 1
Uncharacterized HTH-type transcriptional regulator YcjW 1
Uncharacterized HTH-type transcriptional regulator YkvZ 1
Uncharacterized HTH-type transcriptional regulator YvdE 1
Uncharacterized HTH-type transcriptional regulator in aml 5'region 1
Uncharacterized HTH-type transcriptional regulator in aml 5'region (Fragment) 1

Protein length

Min length 330
Max length 332
Mean length (sd) 330.3 (0.8)
Median length 330.0

Protein length distribution