Orthogroup:group_118


Homologs in group_118

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11 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03965 FBDBKF_03965 Morganella morganii S1 virB4 conjugative transfer ATPase
FBDBKF_16795 FBDBKF_16795 Morganella morganii S1 - conjugative transfer ATPase
EHELCC_06570 EHELCC_06570 Morganella morganii S2 virB4 conjugative transfer ATPase
EHELCC_10665 EHELCC_10665 Morganella morganii S2 - conjugative transfer ATPase
NLDBIP_06895 NLDBIP_06895 Morganella morganii S4 virB4 conjugative transfer ATPase
NLDBIP_11010 NLDBIP_11010 Morganella morganii S4 - conjugative transfer ATPase
LHKJJB_06430 LHKJJB_06430 Morganella morganii S3 virB4 conjugative transfer ATPase
LHKJJB_10345 LHKJJB_10345 Morganella morganii S3 - conjugative transfer ATPase
HKOGLL_04500 HKOGLL_04500 Morganella morganii S5 virB4 conjugative transfer ATPase
HKOGLL_16510 HKOGLL_16510 Morganella morganii S5 - conjugative transfer ATPase
PMI_RS12720 PMI_RS12720 Proteus mirabilis HI4320 - conjugative transfer ATPase

Distribution of group_118 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_118 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_118

Orthogroup content: 11 members

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This page summarizes the annotation of all members of the orthologous group group_118.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 virB4 5
2 - 6

Product

# Product Occurence
1 conjugative transfer ATPase 11

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3451 11 U Intracellular trafficking, secretion, and vesicular transport (U) Type IV secretory pathway, VirB4 component

Pfam domain Annotation(s)

Domain ID Occurences Description
PF11130 11 TraC protein

Protein length

Min length 898
Max length 955
Mean length (sd) 929.1 (29.8)
Median length 955.0

Protein length distribution