Orthogroup:group_118


Homologs in group_118

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11 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04495 FBDBKF_04495 Morganella morganii S1 galS HTH-type transcriptional regulator GalS
FBDBKF_11080 FBDBKF_11080 Morganella morganii S1 purR DNA-binding transcriptional regulator, LacI/PurR family
EHELCC_05145 EHELCC_05145 Morganella morganii S2 purR DNA-binding transcriptional regulator, LacI/PurR family
EHELCC_05785 EHELCC_05785 Morganella morganii S2 galS HTH-type transcriptional regulator GalS
NLDBIP_05465 NLDBIP_05465 Morganella morganii S4 purR DNA-binding transcriptional regulator, LacI/PurR family
NLDBIP_06105 NLDBIP_06105 Morganella morganii S4 galS HTH-type transcriptional regulator GalS
LHKJJB_02345 LHKJJB_02345 Morganella morganii S3 purR DNA-binding transcriptional regulator, LacI/PurR family
LHKJJB_02985 LHKJJB_02985 Morganella morganii S3 galS HTH-type transcriptional regulator GalS
HKOGLL_06460 HKOGLL_06460 Morganella morganii S5 galS HTH-type transcriptional regulator GalS
HKOGLL_15725 HKOGLL_15725 Morganella morganii S5 purR DNA-binding transcriptional regulator, LacI/PurR family
PMI_RS09595 PMI_RS09595 Proteus mirabilis HI4320 - substrate-binding domain-containing protein

Distribution of group_118 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_118 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_118

Orthogroup content: 11 members

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This page summarizes the annotation of all members of the orthologous group group_118.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 galS 5
2 purR 5
3 - 1

Product

# Product Occurence
1 HTH-type transcriptional regulator GalS 5
2 DNA-binding transcriptional regulator, LacI/PurR family 5
3 substrate-binding domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1609 11 K Transcription (K) DNA-binding transcriptional regulator, LacI/PurR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02529 11 LacI family transcriptional regulator, galactose operon repressor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00356 11 Bacterial regulatory proteins, lacI family
PF13377 11 Periplasmic binding protein-like domain

Annotations of the 192 SwissProt hits

Annotation Number of occurrences
Arabinose metabolism transcriptional repressor 3
Catabolite control protein A 12
Catabolite control protein B 1
Catabolite repressor/activator 6
D-ribose/D-allose-binding protein 1
Fructose operon regulatory protein 1
HTH-type transcriptional regulator AglR 1
HTH-type transcriptional regulator AscG 1
HTH-type transcriptional regulator CelR 1
HTH-type transcriptional regulator Cphy_2742 1
HTH-type transcriptional regulator DegA 1
HTH-type transcriptional regulator EbgR 1
HTH-type transcriptional regulator GalR 6
HTH-type transcriptional regulator GalS 2
HTH-type transcriptional regulator GanR 1
HTH-type transcriptional regulator GntR 3
HTH-type transcriptional regulator IdnR 1
HTH-type transcriptional regulator IpsA 1
HTH-type transcriptional regulator KdgR 1
HTH-type transcriptional regulator LacR 1
HTH-type transcriptional regulator MalR 5
HTH-type transcriptional regulator PtxS 3
HTH-type transcriptional regulator RafR 1
HTH-type transcriptional regulator RegA 2
HTH-type transcriptional regulator TreR 2
HTH-type transcriptional regulator pepR1 1
HTH-type transcriptional regulator reg1 1
HTH-type transcriptional repressor CytR 4
HTH-type transcriptional repressor MelR 1
HTH-type transcriptional repressor PurR 88
Lactose operon repressor 1
Lactose operon repressor (Fragment) 2
Maltose regulon regulatory protein MalI 1
Maltose regulon regulatory protein MalI (Fragment) 1
NTD biosynthesis operon regulator NtdR 1
Probable HTH-type transcriptional regulator EndR 1
Probable HTH-type transcriptional repressor ExuR 1
Probable opine utilization operon repressor (Fragment) 1
Ribitol operon repressor 1
Ribose import binding protein RbsB 4
Ribose operon repressor 9
Sucrose operon repressor 9
Uncharacterized HTH-type transcriptional regulator SCO4158 1
Uncharacterized HTH-type transcriptional regulator YcjW 1
Uncharacterized HTH-type transcriptional regulator YkvZ 1
Uncharacterized HTH-type transcriptional regulator YvdE 1
Uncharacterized HTH-type transcriptional regulator in aml 5'region 1
Uncharacterized HTH-type transcriptional regulator in aml 5'region (Fragment) 1

Protein length

Min length 334
Max length 337
Mean length (sd) 335.5 (1.5)
Median length 336.0

Protein length distribution