K02405


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K02405
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K02405
KO K02405
Description RNA polymerase sigma factor FliA

Occurence in the database

K02405 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_520 FBDBKF_00515 86305 87027 -1 fliA DNA-directed RNA polymerase specialized sigma subunit Morganella morganii S1
1 group_520 EHELCC_01030 221841 222563 1 fliA DNA-directed RNA polymerase specialized sigma subunit Morganella morganii S2
2 group_520 NLDBIP_02430 457573 458295 -1 fliA DNA-directed RNA polymerase specialized sigma subunit Morganella morganii S4
3 group_520 LHKJJB_03945 64814 65536 -1 fliA DNA-directed RNA polymerase specialized sigma subunit Morganella morganii S3
4 group_520 HKOGLL_03100 222046 222768 1 fliA DNA-directed RNA polymerase specialized sigma subunit Morganella morganii S5
5 group_520 F4V73_RS06525 1362145 1362867 -1 RNA polymerase sigma factor FliA Morganella psychrotolerans
6 group_520 PMI_RS07905 1732441 1733163 -1 RNA polymerase sigma factor FliA Proteus mirabilis HI4320