K01662


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01662, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01662
KO K01662
Description 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]

KO part of 4 pathways

Thiamine metabolism
Terpenoid backbone biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites

KO part of 1 modules

M00096 Terpenoid backbone biosynthesis C5 isoprenoid biosynthesis, non-mevalonate pathway

Occurence in the database

K01662 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2252 PMI_RS00450 120570 122444 -1 dxs 1-deoxy-D-xylulose-5-phosphate synthase Proteus mirabilis HI4320
1 group_2252 FBDBKF_17360 2630 4498 1 dxs 1-deoxy-D-xylulose-5-phosphate synthase Morganella morganii S1
2 group_2252 EHELCC_17255 2630 4498 1 dxs 1-deoxy-D-xylulose-5-phosphate synthase Morganella morganii S2
3 group_2252 NLDBIP_17940 38298 40166 -1 dxs 1-deoxy-D-xylulose-5-phosphate synthase Morganella morganii S4
4 group_2252 LHKJJB_17860 38296 40164 -1 dxs 1-deoxy-D-xylulose-5-phosphate synthase Morganella morganii S3
5 group_2252 HKOGLL_17870 38296 40164 -1 dxs 1-deoxy-D-xylulose-5-phosphate synthase Morganella morganii S5
6 group_2252 F4V73_RS16535 126304 128172 1 dxs 1-deoxy-D-xylulose-5-phosphate synthase Morganella psychrotolerans