Orthogroup:group_2288


Homologs in group_2288

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17570 FBDBKF_17570 Morganella morganii S1 rplL 50S ribosomal protein L7/L12
EHELCC_18055 EHELCC_18055 Morganella morganii S2 rplL 50S ribosomal protein L7/L12
NLDBIP_18095 NLDBIP_18095 Morganella morganii S4 rplL 50S ribosomal protein L7/L12
LHKJJB_18290 LHKJJB_18290 Morganella morganii S3 rplL 50S ribosomal protein L7/L12
HKOGLL_17910 HKOGLL_17910 Morganella morganii S5 rplL 50S ribosomal protein L7/L12
F4V73_RS14955 F4V73_RS14955 Morganella psychrotolerans rplL 50S ribosomal protein L7/L12
PMI_RS13760 PMI_RS13760 Proteus mirabilis HI4320 rplL 50S ribosomal protein L7/L12

Distribution of group_2288 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2288 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2288

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2288.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplL 7

Product

# Product Occurence
1 50S ribosomal protein L7/L12 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0222 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L7/L12

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02935 7 large subunit ribosomal protein L7/L12 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00542 7 Ribosomal protein L7/L12 C-terminal domain
PF16320 7 Ribosomal protein L7/L12 dimerisation domain

Annotations of the 531 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein bL12 525
Large ribosomal subunit protein bL12c 6

Protein length

Unique protein length 121

Protein length distribution