COG3118


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3118, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG3118 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1326 FBDBKF_08210 19482 19808 1 trxA thioredoxin TrxA Morganella morganii S1
1 group_1779 FBDBKF_12975 95332 96189 1 cnoX Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family Morganella morganii S1
2 group_3517 FBDBKF_18170 477 701 1 Thioredoxin Morganella morganii S1
3 group_1779 EHELCC_06290 265364 266221 1 cnoX Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family Morganella morganii S2
4 group_1326 EHELCC_13315 143917 144243 -1 trxA thioredoxin TrxA Morganella morganii S2
5 group_3517 EHELCC_18205 350 574 1 Thioredoxin Morganella morganii S2
6 group_1779 NLDBIP_06610 306429 307286 1 cnoX Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family Morganella morganii S4
7 group_1326 NLDBIP_13655 143917 144243 -1 trxA thioredoxin TrxA Morganella morganii S4
8 group_3517 NLDBIP_18130 551 775 1 Thioredoxin Morganella morganii S4
9 group_1779 LHKJJB_03490 283953 284810 1 cnoX Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family Morganella morganii S3
10 group_1326 LHKJJB_12900 18200 18526 1 trxA thioredoxin TrxA Morganella morganii S3
11 group_3517 LHKJJB_18325 389 613 1 Thioredoxin Morganella morganii S3
12 group_1779 HKOGLL_06965 205817 206674 1 cnoX Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family Morganella morganii S5
13 group_1326 HKOGLL_12130 143917 144243 -1 trxA thioredoxin TrxA Morganella morganii S5
14 group_3517 HKOGLL_18060 367 591 1 Thioredoxin Morganella morganii S5
15 group_1779 F4V73_RS16160 35334 36200 1 co-chaperone YbbN Morganella psychrotolerans
16 group_1326 F4V73_RS18760 20636 20962 1 trxA thioredoxin TrxA Morganella psychrotolerans
17 group_4371 PMI_RS03730 840926 841318 1 thioredoxin family protein Proteus mirabilis HI4320
18 group_1779 PMI_RS10690 2350476 2351333 1 co-chaperone YbbN Proteus mirabilis HI4320
19 group_1326 PMI_RS16470 3632554 3632880 1 trxA thioredoxin TrxA Proteus mirabilis HI4320