COG3118
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3118, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 20 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family |
Function(s) descr. |
Posttranslational modification, protein turnover, chaperones (O) |
Occurence in the database
COG3118 is associated with 20 different proteins (see tab "Protein list" and "Profile") |
The 20 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_1326 |
FBDBKF_08210 |
19482 |
19808 |
1 |
trxA |
thioredoxin TrxA |
Morganella morganii S1 |
1 |
group_1779 |
FBDBKF_12975 |
95332 |
96189 |
1 |
cnoX |
Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family |
Morganella morganii S1 |
2 |
group_3517 |
FBDBKF_18170 |
477 |
701 |
1 |
|
Thioredoxin |
Morganella morganii S1 |
3 |
group_1779 |
EHELCC_06290 |
265364 |
266221 |
1 |
cnoX |
Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family |
Morganella morganii S2 |
4 |
group_1326 |
EHELCC_13315 |
143917 |
144243 |
-1 |
trxA |
thioredoxin TrxA |
Morganella morganii S2 |
5 |
group_3517 |
EHELCC_18205 |
350 |
574 |
1 |
|
Thioredoxin |
Morganella morganii S2 |
6 |
group_1779 |
NLDBIP_06610 |
306429 |
307286 |
1 |
cnoX |
Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family |
Morganella morganii S4 |
7 |
group_1326 |
NLDBIP_13655 |
143917 |
144243 |
-1 |
trxA |
thioredoxin TrxA |
Morganella morganii S4 |
8 |
group_3517 |
NLDBIP_18130 |
551 |
775 |
1 |
|
Thioredoxin |
Morganella morganii S4 |
9 |
group_1779 |
LHKJJB_03490 |
283953 |
284810 |
1 |
cnoX |
Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family |
Morganella morganii S3 |
10 |
group_1326 |
LHKJJB_12900 |
18200 |
18526 |
1 |
trxA |
thioredoxin TrxA |
Morganella morganii S3 |
11 |
group_3517 |
LHKJJB_18325 |
389 |
613 |
1 |
|
Thioredoxin |
Morganella morganii S3 |
12 |
group_1779 |
HKOGLL_06965 |
205817 |
206674 |
1 |
cnoX |
Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family |
Morganella morganii S5 |
13 |
group_1326 |
HKOGLL_12130 |
143917 |
144243 |
-1 |
trxA |
thioredoxin TrxA |
Morganella morganii S5 |
14 |
group_3517 |
HKOGLL_18060 |
367 |
591 |
1 |
|
Thioredoxin |
Morganella morganii S5 |
15 |
group_1779 |
F4V73_RS16160 |
35334 |
36200 |
1 |
|
co-chaperone YbbN |
Morganella psychrotolerans |
16 |
group_1326 |
F4V73_RS18760 |
20636 |
20962 |
1 |
trxA |
thioredoxin TrxA |
Morganella psychrotolerans |
17 |
group_4371 |
PMI_RS03730 |
840926 |
841318 |
1 |
|
thioredoxin family protein |
Proteus mirabilis HI4320 |
18 |
group_1779 |
PMI_RS10690 |
2350476 |
2351333 |
1 |
|
co-chaperone YbbN |
Proteus mirabilis HI4320 |
19 |
group_1326 |
PMI_RS16470 |
3632554 |
3632880 |
1 |
trxA |
thioredoxin TrxA |
Proteus mirabilis HI4320 |