Orthogroup:group_1383


Homologs in group_1383

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08545 FBDBKF_08545 Morganella morganii S1 tamB Autotransporter translocation and assembly protein TamB
EHELCC_12980 EHELCC_12980 Morganella morganii S2 tamB Autotransporter translocation and assembly protein TamB
NLDBIP_13320 NLDBIP_13320 Morganella morganii S4 tamB Autotransporter translocation and assembly protein TamB
LHKJJB_13235 LHKJJB_13235 Morganella morganii S3 tamB Autotransporter translocation and assembly protein TamB
HKOGLL_11795 HKOGLL_11795 Morganella morganii S5 tamB Autotransporter translocation and assembly protein TamB
F4V73_RS09770 F4V73_RS09770 Morganella psychrotolerans - translocation/assembly module TamB domain-containing protein
PMI_RS16880 PMI_RS16880 Proteus mirabilis HI4320 - translocation/assembly module TamB domain-containing protein

Distribution of group_1383 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1383 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1383

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1383.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tamB 5
2 - 2

Product

# Product Occurence
1 Autotransporter translocation and assembly protein TamB 5
2 translocation/assembly module TamB domain-containing protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2911 7 U Intracellular trafficking, secretion, and vesicular transport (U) Autotransporter translocation and assembly protein TamB

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09800 7 translocation and assembly module TamB - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04357 7 TamB, inner membrane protein subunit of TAM complex

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Translocation and assembly module subunit TamB 4
Uncharacterized protein BU087 1
Uncharacterized protein BUsg_080 1

Protein length

Min length 1256
Max length 1273
Mean length (sd) 1258.6 (6.4)
Median length 1256.0

Protein length distribution