COG1651
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1651, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 22 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
Protein thiol-disulfide isomerase DsbC |
Function(s) descr. |
Posttranslational modification, protein turnover, chaperones (O) |
Occurence in the database
COG1651 is associated with 22 different proteins (see tab "Protein list" and "Profile") |
The 22 proteins are classified into 3 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_256 |
FBDBKF_04095 |
5082 |
5774 |
-1 |
dsbC |
bifunctional protein-disulfide isomerase/oxidoreductase DsbC |
Morganella morganii S1 |
1 |
group_1543 |
FBDBKF_10000 |
92812 |
93540 |
-1 |
dsbC |
Protein thiol-disulfide isomerase DsbC |
Morganella morganii S1 |
2 |
group_1705 |
FBDBKF_11885 |
28594 |
29217 |
-1 |
dsbA |
thiol:disulfide interchange protein DsbA |
Morganella morganii S1 |
3 |
group_1543 |
EHELCC_04800 |
284777 |
285505 |
-1 |
dsbC |
Protein thiol-disulfide isomerase DsbC |
Morganella morganii S2 |
4 |
group_256 |
EHELCC_05385 |
64539 |
65231 |
-1 |
dsbC |
bifunctional protein-disulfide isomerase/oxidoreductase DsbC |
Morganella morganii S2 |
5 |
group_1705 |
EHELCC_14420 |
105488 |
106111 |
1 |
dsbA |
thiol:disulfide interchange protein DsbA |
Morganella morganii S2 |
6 |
group_1543 |
NLDBIP_04800 |
284573 |
285301 |
-1 |
dsbC |
Protein thiol-disulfide isomerase DsbC |
Morganella morganii S4 |
7 |
group_256 |
NLDBIP_05705 |
105604 |
106296 |
-1 |
dsbC |
bifunctional protein-disulfide isomerase/oxidoreductase DsbC |
Morganella morganii S4 |
8 |
group_1705 |
NLDBIP_15515 |
109425 |
110048 |
1 |
dsbA |
thiol:disulfide interchange protein DsbA |
Morganella morganii S4 |
9 |
group_256 |
LHKJJB_02585 |
83128 |
83820 |
-1 |
dsbC |
bifunctional protein-disulfide isomerase/oxidoreductase DsbC |
Morganella morganii S3 |
10 |
group_1543 |
LHKJJB_13830 |
50077 |
50805 |
1 |
dsbC |
Protein thiol-disulfide isomerase DsbC |
Morganella morganii S3 |
11 |
group_1705 |
LHKJJB_15095 |
28594 |
29217 |
-1 |
dsbA |
thiol:disulfide interchange protein DsbA |
Morganella morganii S3 |
12 |
group_256 |
HKOGLL_06060 |
4992 |
5684 |
-1 |
dsbC |
bifunctional protein-disulfide isomerase/oxidoreductase DsbC |
Morganella morganii S5 |
13 |
group_1543 |
HKOGLL_12705 |
93593 |
94321 |
-1 |
dsbC |
Protein thiol-disulfide isomerase DsbC |
Morganella morganii S5 |
14 |
group_1705 |
HKOGLL_14215 |
15257 |
15880 |
-1 |
dsbA |
thiol:disulfide interchange protein DsbA |
Morganella morganii S5 |
15 |
group_1543 |
F4V73_RS00335 |
78216 |
78944 |
1 |
|
DsbA family protein |
Morganella psychrotolerans |
16 |
group_256 |
F4V73_RS08535 |
1763073 |
1763768 |
-1 |
dsbC |
bifunctional protein-disulfide isomerase/oxidoreductase DsbC |
Morganella psychrotolerans |
17 |
group_1705 |
F4V73_RS14770 |
188248 |
188871 |
1 |
dsbA |
thiol:disulfide interchange protein DsbA |
Morganella psychrotolerans |
18 |
group_1543 |
PMI_RS02170 |
508513 |
509244 |
1 |
|
DsbA family protein |
Proteus mirabilis HI4320 |
19 |
group_256 |
PMI_RS09915 |
2151687 |
2152394 |
-1 |
dsbC |
bifunctional protein-disulfide isomerase/oxidoreductase DsbC |
Proteus mirabilis HI4320 |
20 |
group_256 |
PMI_RS12170 |
2691642 |
2692334 |
-1 |
|
DsbC family protein |
Proteus mirabilis HI4320 |
21 |
group_1705 |
PMI_RS13970 |
3103677 |
3104300 |
-1 |
dsbA |
thiol:disulfide interchange protein DsbA |
Proteus mirabilis HI4320 |