Homologs in group_1543

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10000 FBDBKF_10000 60.3 Morganella morganii S1 dsbC Protein thiol-disulfide isomerase DsbC
EHELCC_04800 EHELCC_04800 60.3 Morganella morganii S2 dsbC Protein thiol-disulfide isomerase DsbC
NLDBIP_04800 NLDBIP_04800 60.3 Morganella morganii S4 dsbC Protein thiol-disulfide isomerase DsbC
LHKJJB_13830 LHKJJB_13830 60.3 Morganella morganii S3 dsbC Protein thiol-disulfide isomerase DsbC
HKOGLL_12705 HKOGLL_12705 60.3 Morganella morganii S5 dsbC Protein thiol-disulfide isomerase DsbC
F4V73_RS00335 F4V73_RS00335 58.7 Morganella psychrotolerans - DsbA family protein

Distribution of the homologs in the orthogroup group_1543

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1543

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O32218 5.52e-17 80 28 4 183 1 bdbD Disulfide bond formation protein D Bacillus subtilis (strain 168)
Q81I73 6.93e-07 52 24 6 172 3 bdbD Probable disulfide bond formation protein D Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q81YT8 8.31e-07 51 23 6 178 3 bdbD Probable disulfide bond formation protein D Bacillus anthracis
Q7W0K2 1.07e-05 48 25 5 143 1 dsbA Thiol:disulfide interchange protein DsbA Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q7W2Q0 1.91e-05 47 25 5 143 1 dsbA Thiol:disulfide interchange protein DsbA Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Q7WDP8 1.91e-05 47 25 5 143 3 dsbA Thiol:disulfide interchange protein DsbA Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q2KTN7 0.000868 42 25 6 143 3 dsbA Thiol:disulfide interchange protein DsbA Bordetella avium (strain 197N)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02170
Feature type CDS
Gene -
Product DsbA family protein
Location 508513 - 509244 (strand: 1)
Length 732 (nucleotides) / 243 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1543
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13462 Thioredoxin
PF18312 Copper resistance protein ScsC N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1651 Posttranslational modification, protein turnover, chaperones (O) O Protein thiol-disulfide isomerase DsbC

Protein Sequence

MKKTLSVLVISSLLFGANVQAAALNAAQEKEVRALVRDTLVSNPEILEEAIMALQTKKADEQQAQFRQALASEHDALYNDAASPRIGAKDAKLVLVSFTDYNCPYCKRFDPLLEKITEQYPDVAVIIKPLPFKGESSAKASQAVLSVWKEDPKAFLALHQRLMQKKTMLDNASIEDAMKSTNTSKIKLTDDSLKTLQNNLELSRKLGIQGTPATVIGDTILPGAVDYDQLEIIVKEQLAKVKK

Flanking regions ( +/- flanking 50bp)

AATAAAGATCTAATGTTAACTATTCTTTCAGAGGCTAAAGGAGCCCAATAATGAAAAAAACACTTTCTGTACTGGTTATCTCTTCGTTACTTTTTGGTGCAAATGTTCAAGCCGCTGCCTTGAATGCAGCTCAAGAAAAAGAAGTACGTGCATTAGTTCGTGATACTTTAGTGAGTAATCCTGAGATTTTGGAAGAAGCTATCATGGCATTGCAAACTAAGAAGGCAGATGAGCAACAAGCACAGTTCCGTCAAGCATTGGCCTCTGAACATGATGCATTATACAACGATGCGGCAAGTCCACGTATTGGCGCTAAAGATGCTAAGTTAGTGTTAGTGTCGTTCACTGATTATAACTGCCCGTATTGCAAACGCTTTGACCCATTATTAGAAAAGATCACCGAACAATACCCTGATGTGGCGGTTATCATTAAACCATTACCATTTAAAGGTGAAAGCTCTGCTAAAGCCTCTCAGGCGGTGCTTTCTGTCTGGAAAGAAGATCCAAAAGCATTCTTAGCACTTCATCAACGTTTGATGCAGAAGAAAACGATGCTAGATAATGCAAGTATTGAAGATGCAATGAAGAGCACTAATACTAGCAAAATTAAGTTAACTGATGACAGCTTAAAAACGTTGCAAAATAACTTAGAGCTTTCTCGTAAACTGGGTATTCAAGGTACGCCAGCGACGGTAATTGGTGATACTATTTTACCGGGTGCTGTTGATTATGATCAGTTAGAAATTATTGTGAAAGAACAACTGGCGAAAGTGAAAAAATAATGGCAAATCGTTTACGAAAATGGGGTAAAGAATTAATTATTCTCGCCCTT