Homologs in group_1745

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11885 FBDBKF_11885 86.0 Morganella morganii S1 dsbA thiol:disulfide interchange protein DsbA
EHELCC_14420 EHELCC_14420 86.0 Morganella morganii S2 dsbA thiol:disulfide interchange protein DsbA
NLDBIP_15515 NLDBIP_15515 86.0 Morganella morganii S4 dsbA thiol:disulfide interchange protein DsbA
LHKJJB_15095 LHKJJB_15095 86.0 Morganella morganii S3 dsbA thiol:disulfide interchange protein DsbA
HKOGLL_14215 HKOGLL_14215 86.0 Morganella morganii S5 dsbA thiol:disulfide interchange protein DsbA
PMI_RS13970 PMI_RS13970 56.3 Proteus mirabilis HI4320 dsbA thiol:disulfide interchange protein DsbA

Distribution of the homologs in the orthogroup group_1745

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1745

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9XBV2 1.22e-89 265 58 2 208 3 dsbA Thiol:disulfide interchange protein DsbA Yersinia pestis
Q9RB10 7.34e-85 253 53 2 208 3 dsbA Thiol:disulfide interchange protein DsbA Pectobacterium carotovorum subsp. carotovorum
P0A2H9 2.39e-84 251 56 2 208 1 dsbA Thiol:disulfide interchange protein DsbA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2I0 2.39e-84 251 56 2 208 3 dsbA Thiol:disulfide interchange protein DsbA Salmonella enteritidis
P0A4L5 2.61e-84 251 56 1 208 3 dsbA Thiol:disulfide interchange protein DsbA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A4L6 2.61e-84 251 56 1 208 3 dsbA Thiol:disulfide interchange protein DsbA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P52235 7.07e-84 250 55 1 208 1 dsbA Thiol:disulfide interchange protein DsbA Shigella flexneri
P0AEG4 9.93e-84 249 55 1 208 1 dsbA Thiol:disulfide interchange protein DsbA Escherichia coli (strain K12)
P0AEG5 9.93e-84 249 55 1 208 3 dsbA Thiol:disulfide interchange protein DsbA Escherichia coli O157:H7
Q9X6N0 1.13e-83 249 55 2 208 3 dsbA Thiol:disulfide interchange protein DsbA Salmonella typhi
P52234 1.11e-81 244 53 2 208 3 dsbA Thiol:disulfide interchange protein DsbA Dickeya dadantii (strain 3937)
P31810 3.95e-48 159 42 6 210 3 dsbA Thiol:disulfide interchange protein DsbA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57505 8.04e-46 153 34 2 209 3 dsbA Thiol:disulfide interchange protein DsbA Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P32557 1.45e-38 134 37 5 209 1 dsbA Thiol:disulfide interchange protein DsbA Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q8K9D1 6.56e-36 128 33 2 209 3 dsbA Thiol:disulfide interchange protein DsbA Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AD2 3.41e-35 126 30 3 210 3 dsbA Thiol:disulfide interchange protein DsbA Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q44504 9.22e-18 81 38 6 165 3 dsbA Thiol:disulfide interchange protein DsbA Azotobacter vinelandii
O52376 1.9e-16 77 34 8 173 3 dsbA Thiol:disulfide interchange protein DsbA Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
P0C2B2 6.39e-15 73 31 8 191 1 dsbA Thiol:disulfide interchange protein DsbA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q02DM0 6.39e-15 73 31 8 191 3 dsbA Thiol:disulfide interchange protein DsbA Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9RHV8 6e-13 68 30 4 161 3 dsbA Thiol:disulfide interchange protein DsbA Burkholderia cepacia
P50024 1.61e-09 58 26 8 207 3 dsbA Thiol:disulfide interchange protein DsbA Legionella pneumophila
P0A4L8 0.000294 43 24 9 203 3 dsbL Thiol:disulfide interchange protein DsbL Klebsiella pneumoniae
P0A4L7 0.000294 43 24 9 203 1 dsbL Thiol:disulfide interchange protein DsbL Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q2KTN7 0.000307 43 27 8 166 3 dsbA Thiol:disulfide interchange protein DsbA Bordetella avium (strain 197N)
Q7W2Q0 0.000537 43 27 8 161 1 dsbA Thiol:disulfide interchange protein DsbA Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Q7WDP8 0.000537 43 27 8 161 3 dsbA Thiol:disulfide interchange protein DsbA Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14770
Feature type CDS
Gene dsbA
Product thiol:disulfide interchange protein DsbA
Location 188248 - 188871 (strand: 1)
Length 624 (nucleotides) / 207 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000004
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1745
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01323 DSBA-like thioredoxin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1651 Posttranslational modification, protein turnover, chaperones (O) O Protein thiol-disulfide isomerase DsbC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03673 protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] Cationic antimicrobial peptide (CAMP) resistance -

Protein Sequence

MKKFWLAMMGFAMTFSVFASPVAGKQYTELNTPVANQPEVVEFFSFYCPHCYQFEENFKVPEAINKNLPEGTKHERYHVDFLGGPMGPELTKAWSVAMAMGVEDKVTPILFKGIQETGTIKNADDVRAAFIQAGITGDDYDAAANSIFVKSLIAKQQKAAADYKLRGVPAVFVKGKYQINNGGLEVKDVAQYGKAFSDTVNYLLKQK

Flanking regions ( +/- flanking 50bp)

AACCGCCGCTGACGCGTTATCAGCCTTATTGATTTTCAGGAGATACAATGATGAAGAAGTTTTGGTTAGCAATGATGGGATTCGCGATGACATTCAGTGTGTTCGCCTCACCTGTTGCCGGCAAACAGTATACTGAACTTAACACTCCGGTTGCGAATCAGCCTGAGGTAGTGGAATTTTTCTCTTTCTATTGCCCGCATTGCTACCAGTTTGAAGAAAATTTCAAAGTACCGGAAGCCATCAATAAAAACCTGCCGGAAGGAACTAAACATGAACGCTATCATGTTGATTTCTTAGGCGGTCCTATGGGTCCTGAATTGACTAAAGCCTGGTCTGTGGCGATGGCGATGGGTGTGGAAGATAAAGTCACTCCGATTCTGTTCAAAGGGATCCAGGAAACCGGTACTATCAAAAATGCAGATGATGTACGTGCCGCTTTCATTCAGGCAGGTATCACCGGCGATGATTATGACGCCGCTGCGAACAGCATTTTTGTTAAATCTCTGATTGCCAAGCAGCAGAAAGCAGCCGCTGATTATAAATTACGTGGCGTTCCTGCGGTCTTCGTCAAGGGCAAATACCAGATCAACAATGGTGGTCTGGAAGTGAAAGACGTGGCGCAATACGGCAAAGCATTCTCTGACACTGTGAATTATTTACTGAAACAGAAGTAATTTCTGTTCAGGCAGTAACAATAAGAAGGAAGCTGGGTGACCGGTTTCCT