Homologs in group_256

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04095 FBDBKF_04095 28.8 Morganella morganii S1 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC
EHELCC_05385 EHELCC_05385 28.8 Morganella morganii S2 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC
NLDBIP_05705 NLDBIP_05705 28.8 Morganella morganii S4 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC
LHKJJB_02585 LHKJJB_02585 28.8 Morganella morganii S3 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC
HKOGLL_06060 HKOGLL_06060 28.8 Morganella morganii S5 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC
F4V73_RS08535 F4V73_RS08535 26.8 Morganella psychrotolerans dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC
PMI_RS09915 PMI_RS09915 25.8 Proteus mirabilis HI4320 dsbC bifunctional protein-disulfide isomerase/oxidoreductase DsbC

Distribution of the homologs in the orthogroup group_256

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_256

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AEG6 4.17e-15 75 26 6 198 1 dsbC Thiol:disulfide interchange protein DsbC Escherichia coli (strain K12)
P0AEG7 4.17e-15 75 26 6 198 3 dsbC Thiol:disulfide interchange protein DsbC Escherichia coli O157:H7
P55890 7.68e-14 71 26 6 198 1 dsbC Thiol:disulfide interchange protein DsbC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P39691 3.72e-12 67 25 11 243 3 dsbC Thiol:disulfide interchange protein DsbC Dickeya dadantii (strain 3937)
Q9CP65 1.17e-10 62 26 9 241 3 dsbC Thiol:disulfide interchange protein DsbC Pasteurella multocida (strain Pm70)
Q7W396 1.48e-09 60 25 5 184 3 dsbC Probable thiol:disulfide interchange protein DsbC Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Q7WEL4 1.48e-09 60 25 5 184 3 dsbC Probable thiol:disulfide interchange protein DsbC Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q7VU58 1.19e-08 57 26 6 184 1 dsbC Probable thiol:disulfide interchange protein DsbC Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P45111 2.56e-08 56 28 10 203 1 dsbC Thiol:disulfide interchange protein DsbC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q2KU21 8.2e-08 55 25 5 187 3 dsbC Probable thiol:disulfide interchange protein DsbC Bordetella avium (strain 197N)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12170
Feature type CDS
Gene -
Product DsbC family protein
Location 2691642 - 2692334 (strand: -1)
Length 693 (nucleotides) / 230 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_256
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF10411 Disulfide bond isomerase protein N-terminal domain
PF13098 Thioredoxin-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1651 Posttranslational modification, protein turnover, chaperones (O) O Protein thiol-disulfide isomerase DsbC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] - -

Protein Sequence

MRKLSPIILALALSPLVQAEPVSEVSPVGKIDGMVSLPVTGMKAVESNGRIVFMSDSGRFVIDGTLYDAWSKKPLTSLEEIREAGNTLDLSRLGLKMDDLNPLTLGEGKKKVVVFVDPRCPHCHELLKQALPLTKEYTFQILPVPVLGPDSERQVRQLGCARDKKAATDALLNGRIGNLEQDDACNLEPMQRTLVTAQILGIQGVPFIVANDGRISRGRPYDLSAWLEGR

Flanking regions ( +/- flanking 50bp)

AGGACAACTGCATAGACTGGAGCCTCGATTTACATTAGCGAGGACTCCTCATGCGAAAACTATCTCCAATTATTCTGGCGCTTGCGCTGTCTCCTTTGGTTCAAGCTGAACCAGTGTCTGAAGTGTCGCCCGTTGGCAAAATTGACGGCATGGTTTCTTTGCCTGTCACGGGTATGAAAGCGGTTGAAAGCAATGGCCGTATTGTTTTCATGTCAGACAGTGGCCGGTTCGTCATTGATGGCACGCTCTATGATGCCTGGTCGAAAAAGCCGCTTACTAGCCTTGAAGAAATTCGAGAAGCGGGAAACACGCTGGACTTAAGTCGTCTTGGTTTAAAAATGGATGATTTGAACCCACTGACGCTGGGCGAAGGCAAAAAGAAAGTGGTGGTCTTTGTTGATCCACGATGCCCGCACTGCCATGAGCTTTTGAAACAAGCTTTACCGCTAACCAAAGAATACACCTTCCAAATACTCCCTGTGCCAGTGCTTGGTCCTGATTCAGAGCGTCAGGTTCGCCAGCTTGGCTGTGCGCGTGACAAAAAAGCGGCCACCGATGCATTGCTGAATGGCCGGATTGGTAACCTAGAACAGGATGATGCCTGCAACTTAGAACCAATGCAGCGTACCTTGGTGACGGCTCAAATCCTGGGCATTCAAGGTGTGCCTTTCATCGTCGCCAATGATGGTCGCATCAGCCGAGGCCGTCCTTATGATCTTTCTGCTTGGTTGGAGGGGCGTTAATGAAAGCCTCTCTGTATTCAGGGCAACGCGCTTCTGAGCTATTGCCAGTA