Homologs in group_1543

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10000 FBDBKF_10000 87.2 Morganella morganii S1 dsbC Protein thiol-disulfide isomerase DsbC
EHELCC_04800 EHELCC_04800 87.2 Morganella morganii S2 dsbC Protein thiol-disulfide isomerase DsbC
NLDBIP_04800 NLDBIP_04800 87.2 Morganella morganii S4 dsbC Protein thiol-disulfide isomerase DsbC
LHKJJB_13830 LHKJJB_13830 87.2 Morganella morganii S3 dsbC Protein thiol-disulfide isomerase DsbC
HKOGLL_12705 HKOGLL_12705 87.2 Morganella morganii S5 dsbC Protein thiol-disulfide isomerase DsbC
PMI_RS02170 PMI_RS02170 58.7 Proteus mirabilis HI4320 - DsbA family protein

Distribution of the homologs in the orthogroup group_1543

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1543

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O32218 3.3e-11 64 23 4 192 1 bdbD Disulfide bond formation protein D Bacillus subtilis (strain 168)
Q9S2C8 5.41e-06 50 24 5 177 3 nhaA2 Na(+)/H(+) antiporter NhaA 2 Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q7W0K2 0.000301 44 27 5 144 1 dsbA Thiol:disulfide interchange protein DsbA Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
A1SHU2 0.000315 45 25 4 159 3 nhaA2 Na(+)/H(+) antiporter NhaA 2 Nocardioides sp. (strain ATCC BAA-499 / JS614)
Q7W2Q0 0.000334 43 27 5 144 1 dsbA Thiol:disulfide interchange protein DsbA Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Q7WDP8 0.000334 43 27 5 144 3 dsbA Thiol:disulfide interchange protein DsbA Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00335
Feature type CDS
Gene -
Product DsbA family protein
Location 78216 - 78944 (strand: 1)
Length 729 (nucleotides) / 242 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1543
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01323 DSBA-like thioredoxin domain
PF18312 Copper resistance protein ScsC N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1651 Posttranslational modification, protein turnover, chaperones (O) O Protein thiol-disulfide isomerase DsbC

Protein Sequence

MKKTLAALIIGSLFFTATANAAALTAGQEAQVRELVRDTLVKNPEILEEAIAALQQKQNEKQSAQVKDAVKANAAALFNDKYTPRIGSKTPKLTIVSFTDYNCPYCKRFDPQLEAAVKNNPDVAVVFKLLPFKGESSLNSSRAALSVWETKPEAFVQLHNRFMQKKTALTQDDIDKAMKTANVGDVKITENSMNTMRMNMMLAEQLGVQGTPATLIGDVMLPGAVDDAQLDAVIKEELAKVK

Flanking regions ( +/- flanking 50bp)

GACAGAGAAACCGTCTTACACTTATTAAATCAGTCACAAGGAATTGAACCATGAAAAAAACACTCGCGGCTTTAATTATCGGCTCGCTCTTTTTTACCGCCACAGCAAACGCCGCGGCGTTAACGGCAGGCCAGGAAGCGCAGGTGCGTGAATTGGTTCGTGATACGCTGGTTAAAAACCCTGAAATTCTGGAAGAAGCGATTGCTGCATTACAGCAAAAACAGAATGAAAAACAGAGCGCACAAGTGAAAGATGCGGTGAAAGCGAATGCAGCGGCGCTGTTTAATGATAAATACACACCGCGCATCGGGTCAAAAACACCAAAACTGACGATTGTCTCTTTTACCGATTATAACTGCCCGTATTGCAAACGTTTTGATCCGCAGTTAGAAGCCGCCGTTAAAAATAACCCGGATGTTGCAGTGGTATTTAAACTGCTGCCGTTTAAAGGTGAAAGCTCGCTGAACTCAAGCCGCGCGGCGCTCTCTGTCTGGGAAACCAAACCGGAAGCCTTTGTTCAGTTGCATAACCGTTTTATGCAGAAAAAAACGGCACTGACGCAGGATGATATCGACAAAGCAATGAAAACCGCCAATGTGGGTGATGTGAAAATCACAGAAAACAGCATGAATACCATGCGCATGAATATGATGCTGGCAGAGCAGCTTGGTGTGCAGGGTACACCGGCGACACTGATTGGCGATGTTATGTTGCCTGGTGCGGTTGATGATGCACAGTTAGATGCCGTCATTAAAGAAGAACTGGCTAAGGTCAAATAATGAAATTACTGCGCAGATGGGGAAAGGAATTTCTCCTGCTGCTGGTACTT