COG1142


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1142, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fe-S-cluster-containing hydrogenase component 2
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1142 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_785 FBDBKF_03635 129999 130547 -1 hydN electron transport protein HydN Morganella morganii S1
1 group_798 FBDBKF_03745 152857 153477 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S1
2 group_798 EHELCC_06790 93626 94246 1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S2
3 group_785 EHELCC_06900 116556 117104 1 hydN electron transport protein HydN Morganella morganii S2
4 group_798 NLDBIP_07115 93499 94119 1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S4
5 group_785 NLDBIP_07225 116429 116977 1 hydN electron transport protein HydN Morganella morganii S4
6 group_798 LHKJJB_06650 57245 57865 1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S3
7 group_785 LHKJJB_06760 80175 80723 1 hydN electron transport protein HydN Morganella morganii S3
8 group_785 HKOGLL_04170 152664 153212 -1 hydN electron transport protein HydN Morganella morganii S5
9 group_798 HKOGLL_04280 175522 176142 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S5
10 group_798 F4V73_RS11125 363961 364578 1 4Fe-4S dicluster domain-containing protein Morganella psychrotolerans
11 group_785 F4V73_RS11230 388080 388628 1 hydN electron transport protein HydN Morganella psychrotolerans
12 group_798 PMI_RS12500 2772202 2772822 -1 4Fe-4S dicluster domain-containing protein Proteus mirabilis HI4320
13 group_785 PMI_RS17815 3915209 3915766 1 hydN electron transport protein HydN Proteus mirabilis HI4320