COG1132

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG1132
Protein list: lists the 35 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description ABC-type multidrug transport system, ATPase and permease component
Function(s) descr. Defense mechanisms (V)

Occurence in the database

COG1132 is associated with 35 different proteins
The 35 proteins are classified into 6 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1291 FBDBKF_07175 108961 110706 1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S1
1 group_2157 FBDBKF_15925 35174 36913 1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S1
2 group_2158 FBDBKF_15930 36906 38702 1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S1
3 group_3025 FBDBKF_17900 18508 20274 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S1
4 group_371 FBDBKF_17905 20267 21994 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S1
5 group_1291 EHELCC_03795 75480 77225 -1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S2
6 group_371 EHELCC_06430 14382 16109 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S2
7 group_3025 EHELCC_06435 16102 17868 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S2
8 group_2157 EHELCC_18525 22613 24352 1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S2
9 group_2158 EHELCC_18530 24345 26141 1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S2
10 group_1291 NLDBIP_03795 75276 77021 -1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S4
11 group_371 NLDBIP_06750 14255 15982 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S4
12 group_3025 NLDBIP_06755 15975 17741 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S4
13 group_2157 NLDBIP_17360 22613 24352 1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S4
14 group_2158 NLDBIP_17365 24345 26141 1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S4
15 group_1291 LHKJJB_09625 75390 77135 -1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S3
16 group_2158 LHKJJB_17295 30047 31843 -1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S3
17 group_2157 LHKJJB_17300 31836 33575 -1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S3
18 group_3025 LHKJJB_18905 18516 20282 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S3
19 group_371 LHKJJB_18910 20275 22002 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S3
20 group_3025 HKOGLL_04635 251900 253666 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S5
21 group_371 HKOGLL_04640 253659 255386 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S5
22 group_1291 HKOGLL_09350 113917 115662 1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S5
23 group_2157 HKOGLL_17095 22613 24352 1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S5
24 group_2158 HKOGLL_17100 24345 26141 1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S5
25 group_1291 F4V73_RS01360 297128 298876 1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella psychrotolerans
26 group_119 F4V73_RS14175 49446 51161 1 ABC transporter ATP-binding protein Morganella psychrotolerans
27 group_119 F4V73_RS14180 51151 52821 1 ABC transporter ATP-binding protein Morganella psychrotolerans
28 group_2158 F4V73_RS16380 91810 93594 -1 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella psychrotolerans
29 group_2157 F4V73_RS16385 93587 95326 -1 SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella psychrotolerans
30 group_2157 PMI_RS00600 153510 155255 1 SmdA family multidrug ABC transporter permease/ATP-binding protein Proteus mirabilis HI4320
31 group_2158 PMI_RS00605 155242 157029 1 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Proteus mirabilis HI4320
32 group_1291 PMI_RS03530 788571 790316 1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Proteus mirabilis HI4320
33 group_3025 PMI_RS12855 2852159 2853925 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320
34 group_371 PMI_RS12860 2853918 2855645 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320