COG1132


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1132, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 35 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type multidrug transport system, ATPase and permease component
Function(s) descr. Defense mechanisms (V)

Occurence in the database

COG1132 is associated with 35 different proteins (see tab "Protein list" and "Profile")
The 35 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1232 FBDBKF_07175 108961 110706 1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S1
1 group_2120 FBDBKF_15925 35174 36913 1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S1
2 group_2121 FBDBKF_15930 36906 38702 1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S1
3 group_3019 FBDBKF_17900 18508 20274 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S1
4 group_412 FBDBKF_17905 20267 21994 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S1
5 group_1232 EHELCC_03795 75480 77225 -1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S2
6 group_412 EHELCC_06430 14382 16109 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S2
7 group_3019 EHELCC_06435 16102 17868 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S2
8 group_2120 EHELCC_18525 22613 24352 1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S2
9 group_2121 EHELCC_18530 24345 26141 1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S2
10 group_1232 NLDBIP_03795 75276 77021 -1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S4
11 group_412 NLDBIP_06750 14255 15982 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S4
12 group_3019 NLDBIP_06755 15975 17741 -1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S4
13 group_2120 NLDBIP_17360 22613 24352 1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S4
14 group_2121 NLDBIP_17365 24345 26141 1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S4
15 group_1232 LHKJJB_09625 75390 77135 -1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S3
16 group_2121 LHKJJB_17295 30047 31843 -1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S3
17 group_2120 LHKJJB_17300 31836 33575 -1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S3
18 group_3019 LHKJJB_18905 18516 20282 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S3
19 group_412 LHKJJB_18910 20275 22002 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S3
20 group_3019 HKOGLL_04635 251900 253666 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S5
21 group_412 HKOGLL_04640 253659 255386 1 mdlB ABC-type multidrug transport system, ATPase and permease component Morganella morganii S5
22 group_1232 HKOGLL_09350 113917 115662 1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella morganii S5
23 group_2120 HKOGLL_17095 22613 24352 1 mdlB SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella morganii S5
24 group_2121 HKOGLL_17100 24345 26141 1 mdlB SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella morganii S5
25 group_1232 F4V73_RS01360 297128 298876 1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Morganella psychrotolerans
26 group_123 F4V73_RS14175 49446 51161 1 ABC transporter ATP-binding protein Morganella psychrotolerans
27 group_123 F4V73_RS14180 51151 52821 1 ABC transporter ATP-binding protein Morganella psychrotolerans
28 group_2121 F4V73_RS16380 91810 93594 -1 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Morganella psychrotolerans
29 group_2120 F4V73_RS16385 93587 95326 -1 SmdA family multidrug ABC transporter permease/ATP-binding protein Morganella psychrotolerans
30 group_2120 PMI_RS00600 153510 155255 1 SmdA family multidrug ABC transporter permease/ATP-binding protein Proteus mirabilis HI4320
31 group_2121 PMI_RS00605 155242 157029 1 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein Proteus mirabilis HI4320
32 group_1232 PMI_RS03530 788571 790316 1 msbA lipid A ABC transporter ATP-binding protein/permease MsbA Proteus mirabilis HI4320
33 group_3019 PMI_RS12855 2852159 2853925 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320
34 group_412 PMI_RS12860 2853918 2855645 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320