Orthogroup:group_371


Homologs in group_371

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13770 FBDBKF_13770 Morganella morganii S1 lldD FMN-dependent L-lactate dehydrogenase LldD
EHELCC_11440 EHELCC_11440 Morganella morganii S2 lldD FMN-dependent L-lactate dehydrogenase LldD
NLDBIP_11785 NLDBIP_11785 Morganella morganii S4 lldD FMN-dependent L-lactate dehydrogenase LldD
LHKJJB_11645 LHKJJB_11645 Morganella morganii S3 lldD FMN-dependent L-lactate dehydrogenase LldD
HKOGLL_10255 HKOGLL_10255 Morganella morganii S5 lldD FMN-dependent L-lactate dehydrogenase LldD
F4V73_RS08925 F4V73_RS08925 Morganella psychrotolerans - lactate oxidase
F4V73_RS12640 F4V73_RS12640 Morganella psychrotolerans lldD FMN-dependent L-lactate dehydrogenase LldD
PMI_RS17785 PMI_RS17785 Proteus mirabilis HI4320 - lactate oxidase

Distribution of group_371 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_371 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_371

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_371.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lldD 6
2 - 2

Product

# Product Occurence
1 FMN-dependent L-lactate dehydrogenase LldD 6
2 lactate oxidase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1304 8 CIR Energy production and conversion (C)
Lipid transport and metabolism (I)
General function prediction only (R)		 FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10530 2 L-lactate oxidase [EC:1.1.3.2] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01070 8 FMN-dependent dehydrogenase

Annotations of the 242 SwissProt hits

Annotation Number of occurrences
(S)-mandelate dehydrogenase 1
(S)-mandelate dehydrogenase, mitochondrial 1
2-Hydroxyacid oxidase 1
2-Hydroxyacid oxidase 1 3
2-Hydroxyacid oxidase 2 4
4-hydroxymandelate oxidase 1
FMN-dependent alpha-hydroxy acid dehydrogenase PB1A11.03 1
FMN-dependent alpha-hydroxy acid dehydrogenase qulF 1
Glycolate oxidase 1
Glycolate oxidase 1 4
Glycolate oxidase 2 3
Glycolate oxidase 3 3
Glycolate oxidase 5 2
Inosine-5'-monophosphate dehydrogenase 2
Isopentenyl-diphosphate delta-isomerase 77
L-lactate 2-monooxygenase 1
L-lactate dehydrogenase 110
L-lactate dehydrogenase (cytochrome) 3
L-lactate oxidase 10
Oxidase FUB9 3
Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 2
Peroxisomal (S)-2-hydroxyacid oxidase GLO3 1
Peroxisomal (S)-2-hydroxyacid oxidase GLO4 1
Pre-mycofactocin synthase 4
Putative L-lactate dehydrogenase 2

Protein length

Min length 380
Max length 400
Mean length (sd) 384.6 (8.6)
Median length 380.0

Protein length distribution