COG1121


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1121, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type Mn2+/Zn2+ transport system, ATPase component
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG1121 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_638 FBDBKF_02080 103874 104683 -1 znuC zinc ABC transporter ATP-binding protein ZnuC Morganella morganii S1
1 group_1814 FBDBKF_13450 68611 69495 1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S1
2 group_638 EHELCC_02550 491694 492503 -1 znuC zinc ABC transporter ATP-binding protein ZnuC Morganella morganii S2
3 group_1814 EHELCC_08645 205696 206580 -1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S2
4 group_638 NLDBIP_00910 187633 188442 1 znuC zinc ABC transporter ATP-binding protein ZnuC Morganella morganii S4
5 group_1814 NLDBIP_08970 205696 206580 -1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S4
6 group_638 LHKJJB_01125 204243 205052 -1 znuC zinc ABC transporter ATP-binding protein ZnuC Morganella morganii S3
7 group_1814 LHKJJB_05295 50579 51463 1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S3
8 group_638 HKOGLL_01165 209754 210563 -1 znuC zinc ABC transporter ATP-binding protein ZnuC Morganella morganii S5
9 group_1814 HKOGLL_05620 190287 191171 -1 znuC manganese/iron ABC transporter ATP-binding protein Morganella morganii S5
10 group_1814 F4V73_RS03315 706479 707363 -1 manganese/iron ABC transporter ATP-binding protein Morganella psychrotolerans
11 group_638 F4V73_RS04445 939880 940689 -1 znuC zinc ABC transporter ATP-binding protein ZnuC Morganella psychrotolerans
12 group_1814 PMI_RS04985 1091185 1092072 -1 manganese/iron ABC transporter ATP-binding protein Proteus mirabilis HI4320
13 group_638 PMI_RS05555 1211448 1212173 -1 znuC zinc ABC transporter ATP-binding protein ZnuC Proteus mirabilis HI4320